RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RAD23BP54727 409 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 TNIP1Q15025 636 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 LLGL1Q15334 1064 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 SEPT14Q6ZU15 432 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 MAEAQ7L5Y9 396 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 ARHGEF19Q8IW93 802 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 FAM178BQ8IXR5 827 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 LMNTD2Q8IXW0 634 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 CYP4X1Q8N118 509 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 LMO3Q8TAP4 145 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 ERP27Q96DN0 273 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 P2RX7Q99572 595 aaKnown RBP15.18■□□□□ 0.02
SRP54-202ENST00000546080 PAIP2Q9BPZ3 127 aaKnown RBP15.18■□□□□ 0.02
SRP54-202ENST00000546080 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 LGALS13Q9UHV8 139 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 SERPINB13Q9UIV8 391 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 EML1O00423 815 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 KCNQ2O43526 872 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 CDH16O75309 829 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 UFL1O94874 794 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 POTEJP0CG39 1038 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 CETN1Q12798 172 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 AP1ARQ63HQ0 302 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 SLC17A8Q8NDX2 589 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
SRP54-202ENST00000546080 NINJ2Q9NZG7 142 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 DAGLAQ9Y4D2 1042 aa15.18■□□□□ 0.02
SRP54-202ENST00000546080 PEX11AO75192 247 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 IL1R1P14778 569 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ATF2P15336 505 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ATP4AP20648 1035 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
SRP54-202ENST00000546080 FOXN2P32314 431 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 PCK1P35558 622 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 SREBF1P36956 1147 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 CAV1Q03135 178 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 SYDE1Q6ZW31 735 aaPredicted RBP15.17■□□□□ 0.02
SRP54-202ENST00000546080 C1orf186Q6ZWK4 172 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ZNF720Q7Z2F6 126 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ANKRD35Q8N283 1001 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 STK32AQ8WU08 396 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 TMEM237Q96Q45 408 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 PCDHB18PQ96TA0 734 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 CCDC77Q9BR77 488 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 SEL1LQ9UBV2 794 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 NAALADL1Q9UQQ1 740 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 LRRC42Q9Y546 428 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ACTL7BQ9Y614 415 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 FOCADQ5VW36 1801 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 CNTNAP4Q9C0A0 1308 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 SGPL1O95470 568 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 CETPP11597 493 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 MAN1A1P33908 653 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 SHMT1P34896 483 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ZNF76P36508 570 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 CTCFP49711 727 aaPredicted RBP15.17■□□□□ 0.02
SRP54-202ENST00000546080 YARSP54577 528 aaKnown RBP15.17■□□□□ 0.02
SRP54-202ENST00000546080 GPSM2P81274 684 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 PTK6Q13882 451 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 TRIP13Q15645 432 aaPredicted RBP15.17■□□□□ 0.02
SRP54-202ENST00000546080 TPH2Q8IWU9 490 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 SYCP3Q8IZU3 236 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 GRK7Q8WTQ7 553 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ZNF653Q96CK0 615 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 LRRC37BQ96QE4 947 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 HAO1Q9UJM8 370 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 ANAPC5Q9UJX4 755 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 STARD13Q9Y3M8 1113 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 USH1CQ9Y6N9 552 aa15.17■□□□□ 0.02
SRP54-202ENST00000546080 A0A1W2PRG0 241 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 FSCN2O14926 492 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 MAPK13O15264 365 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 GAS8O95995 478 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 TPBGLP0DKB5 382 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 BIRC2Q13490 618 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 FAM13CQ8NE31 585 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 PARD3BQ8TEW8 1205 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 INPP5DQ92835 1189 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
SRP54-202ENST00000546080 ZMYND8Q9ULU4 1186 aaPredicted RBP15.16■□□□□ 0.02
SRP54-202ENST00000546080 FAM47DPA6NHR8 397 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 RASA4BC9J798 803 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 RASA4O43374 803 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 DCTN3O75935 186 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 CYP1A2P05177 515 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 NEFHP12036 1026 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 GZMAP12544 262 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 CHRNB2P17787 502 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 ATP6V1C1P21283 382 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 MRPS35P82673 323 aaKnown RBP15.15■□□□□ 0.02
SRP54-202ENST00000546080 TMED2Q15363 201 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 ODR4Q5SWX8 454 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 ANO7Q6IWH7 933 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 NOP9Q86U38 636 aaKnown RBP15.15■□□□□ 0.02
SRP54-202ENST00000546080 EPS8L1Q8TE68 723 aa15.15■□□□□ 0.02
SRP54-202ENST00000546080 PSPC1Q8WXF1 523 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms