RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 KIAA1217Q5T5P2 1943 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 LOC102724159A0A0B4J2E5 919 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 FBXO24O75426 580 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 TXNP10599 105 aaKnown RBP7.81□□□□□ -1.16
LDHA-223ENST00000545215 EPCAMP16422 314 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 GARTP22102 1010 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 MPLP40238 635 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 SIM1P81133 766 aaPredicted RBP7.81□□□□□ -1.16
LDHA-223ENST00000545215 HTR4Q13639 388 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 SMC1AQ14683 1233 aaKnown RBP7.81□□□□□ -1.16
LDHA-223ENST00000545215 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
LDHA-223ENST00000545215 DHX37Q8IY37 1157 aaKnown RBP7.81□□□□□ -1.16
LDHA-223ENST00000545215 COLGALT1Q8NBJ5 622 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 IER2Q9BTL4 223 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 SLC32A1Q9H598 525 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 CYP39A1Q9NYL5 469 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 LRP2BPQ9P2M1 347 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 COL6A6A6NMZ7 2263 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 SALL3Q9BXA9 1300 aa7.81□□□□□ -1.16
LDHA-223ENST00000545215 COL5A1P20908 1838 aaPredicted RBP7.81□□□□□ -1.16
LDHA-223ENST00000545215 PNMA6EA0A0J9YXQ4 647 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 TEX51A0A1B0GUA7 166 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SPAARA0A1B0GVQ0 90 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SLC28A2O43868 658 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SURF6O75683 361 aaKnown RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 UQCRFS1P1P0C7P4 283 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 STAG3L1P0CL83 205 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 EEF2P13639 858 aaKnown RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 ITPKAP23677 461 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 GRIA4P48058 902 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SOX9P48436 509 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 NASPP49321 788 aaPredicted RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 GATMP50440 423 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 IRX6P78412 446 aaPredicted RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 PLAURQ03405 335 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 OS9Q13438 667 aaPredicted RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 DGKDQ16760 1214 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SPOUT1Q5T280 376 aaKnown RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 FBXL19Q6PCT2 694 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 C15orf39Q6ZRI6 1047 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 RIPOR1Q6ZS17 1223 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 CABP7Q86V35 215 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SPATA5Q8NB90 893 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 PIP4K2CQ8TBX8 421 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SLC22A17Q8WUG5 538 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 PNMA5Q96PV4 448 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SLC30A3Q99726 388 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 NT5C1AQ9BXI3 368 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 CEP44Q9C0F1 390 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 BHLHE41Q9C0J9 482 aaPredicted RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 CCDC8Q9H0W5 538 aaPredicted RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 NUCKS1Q9H1E3 243 aaKnown RBP7.8□□□□□ -1.16
LDHA-223ENST00000545215 DCTPP1Q9H773 170 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 EHMT1Q9H9B1 1298 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 SFXN1Q9H9B4 322 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 MARK1Q9P0L2 795 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 TSC2P49815 1807 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 NBPF19A0A087WUL8 3843 aa7.8□□□□□ -1.16
LDHA-223ENST00000545215 CDX4O14627 284 aaPredicted RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 BNIP3LO60238 219 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 GREM1O60565 184 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 F2P00734 622 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 CELA3AP09093 270 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 LAMP2P13473 410 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 HOXC8P31273 242 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 CXCL12P48061 93 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 LIG3P49916 1009 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 DYNLL1P63167 89 aaKnown RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 NFX1Q12986 1120 aaKnown RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 ZNF423Q2M1K9 1284 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 ZNF746Q6NUN9 644 aaPredicted RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 CENPQQ7L2Z9 268 aaPredicted RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 RTN4RL1Q86UN2 441 aaPredicted RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 SIRT2Q8IXJ6 389 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 LINC01599Q8WXQ3 324 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 STAMQ92783 540 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 GLG1Q92896 1179 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 ATP6V0A1Q93050 837 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 KIF1BPQ96EK5 621 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 LIN37Q96GY3 246 aaPredicted RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 NUP88Q99567 741 aaPredicted RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 RPP25Q9BUL9 199 aaKnown RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 WDR6Q9NNW5 1121 aaKnown RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 TMEM9BQ9NQ34 198 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 RNF146Q9NTX7 359 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 MRPS17Q9Y2R5 130 aaKnown RBP7.79□□□□□ -1.16
LDHA-223ENST00000545215 NUMBLQ9Y6R0 609 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 ATMQ13315 3056 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 POLQO75417 2590 aa7.79□□□□□ -1.16
LDHA-223ENST00000545215 LNP1A1A4G5 178 aa7.78□□□□□ -1.16
LDHA-223ENST00000545215 SLC35F4A4IF30 521 aa7.78□□□□□ -1.16
LDHA-223ENST00000545215 MAN1A2O60476 641 aa7.78□□□□□ -1.16
LDHA-223ENST00000545215 ARIH2O95376 493 aa7.78□□□□□ -1.16
LDHA-223ENST00000545215 SSBP05455 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
LDHA-223ENST00000545215 ALDH5A1P51649 535 aaPredicted RBP7.78□□□□□ -1.16
LDHA-223ENST00000545215 SATB1Q01826 763 aa7.78□□□□□ -1.16
LDHA-223ENST00000545215 ARHGAP1Q07960 439 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms