RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 LTBRP36941 435 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-216ENST00000544996 MPZL3Q6UWV2 235 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 ZBTB33Q86T24 672 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 FAM178BQ8IXR5 827 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-216ENST00000544996 BCL7CQ8WUZ0 217 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-216ENST00000544996 BICD1Q96G01 975 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 UHRF1Q96T88 793 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-216ENST00000544996 ZBP1Q9H171 429 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 CDT1Q9H211 546 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 TOPORSQ9NS56 1045 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-216ENST00000544996 A0A0C4DFX4 3053 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-216ENST00000544996 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 CLDN3O15551 220 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 CTSAP10619 480 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 PROZP22891 400 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 GRM5P41594 1212 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 ME1P48163 572 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 DLX2Q07687 328 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-216ENST00000544996 TUSC3Q13454 348 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 DYMQ7RTS9 669 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 PDILTQ8N807 584 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 DDX12PQ92771 950 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 KCNN1Q92952 543 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 ANKFY1Q9P2R3 1169 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 TBX20Q9UMR3 447 aa17.23■□□□□ 0.35
CCDC78-216ENST00000544996 PLXNA4Q9HCM2 1894 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 REV3LO60673 3130 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 GRXCR2A6NFK2 248 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 TBX10O75333 385 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 BRD1O95696 1058 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 HARSP12081 509 aaKnown RBP17.22■□□□□ 0.35
CCDC78-216ENST00000544996 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC78-216ENST00000544996 OSTNP61366 133 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
CCDC78-216ENST00000544996 ACAP3Q96P50 834 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 LRRC27Q9C0I9 530 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 CD207Q9UJ71 328 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 SSX2IPQ9Y2D8 614 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 IRAK3Q9Y616 596 aa17.22■□□□□ 0.35
CCDC78-216ENST00000544996 MYMKA6NI61 221 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 PTGESO14684 152 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 HNRNPDLO14979 420 aaKnown RBP17.21■□□□□ 0.35
CCDC78-216ENST00000544996 TADA2AO75478 443 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 SOD2P04179 222 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 GAP43P17677 238 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 LIG4P49917 911 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 HSP90AA2PQ14568 343 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-216ENST00000544996 NOLC1Q14978 699 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCDC78-216ENST00000544996 CLUL1Q15846 466 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 KIAA1841Q6NSI8 718 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 IQUBQ8NA54 791 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 ZBTB45Q96K62 511 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-216ENST00000544996 VN1R3Q9BXE9 311 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 EMILIN2Q9BXX0 1053 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 CUEDC2Q9H467 287 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 MRPL17Q9NRX2 175 aaKnown RBP17.21■□□□□ 0.35
CCDC78-216ENST00000544996 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 CLEC1BQ9P126 229 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 XIRP2A4UGR9 3374 aa17.21■□□□□ 0.35
CCDC78-216ENST00000544996 A0A087X0B3 334 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 ABLIM1O14639 778 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 GLP2RO95838 553 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 URODP06132 367 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 GTF2BQ00403 316 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 AMPD3Q01432 767 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 MCL1Q07820 350 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 SMAD4Q13485 552 aaKnown RBP17.2■□□□□ 0.34
CCDC78-216ENST00000544996 PTPN14Q15678 1187 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 AXDND1Q5T1B0 1012 aaPredicted RBP17.2■□□□□ 0.34
CCDC78-216ENST00000544996 LLGL2Q6P1M3 1020 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 SHC4Q6S5L8 630 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 TMEM184AQ6ZMB5 413 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 CEP120Q8N960 986 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 AUTS2Q8WXX7 1259 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 MSLNLQ96KJ4 702 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 ST6GALNAC4Q9H4F1 302 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 SLC38A7Q9NVC3 462 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 ADAM28Q9UKQ2 775 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 BARX2Q9UMQ3 279 aaPredicted RBP17.2■□□□□ 0.34
CCDC78-216ENST00000544996 PCDHA7Q9UN72 937 aa17.2■□□□□ 0.34
CCDC78-216ENST00000544996 IDEP14735 1019 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 NMT1P30419 496 aaKnown RBP17.19■□□□□ 0.34
CCDC78-216ENST00000544996 KRT85P78386 507 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 COASYQ13057 564 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 KYAT1Q16773 422 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 PPFIBP1Q86W92 1011 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 SFR1Q86XK3 245 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 VN1R2Q8NFZ6 395 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 CASP10Q92851 521 aa17.19■□□□□ 0.34
CCDC78-216ENST00000544996 NECAB3Q96P71 396 aaPredicted RBP17.19■□□□□ 0.34
CCDC78-216ENST00000544996 HERC2P3Q9BVR0 1158 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms