RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SERTAD1Q9UHV2 236 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 MRPL42Q9Y6G3 142 aaKnown RBP8.15□□□□□ -1.1
CPSF7-224ENST00000544990 PRRC2BQ5JSZ5 2229 aaKnown RBP8.15□□□□□ -1.1
CPSF7-224ENST00000544990 KIAA1671Q9BY89 1806 aa8.15□□□□□ -1.11
CPSF7-224ENST00000544990 MYH11P35749 1972 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 PP2D1A8MPX8 630 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 E9PMD0 336 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 LINC00271P0C7V0 271 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 LAG3P18627 525 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 LONP1P36776 959 aaKnown RBP8.14□□□□□ -1.11
CPSF7-224ENST00000544990 UBA7P41226 1012 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 NAMPTP43490 491 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 GATMP50440 423 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 MBTD1Q05BQ5 628 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 RESTQ13127 1097 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 TIGD5Q53EQ6 642 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 HYIQ5T013 277 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 NOTUMQ6P988 496 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 GLB1LQ6UWU2 654 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 CABP7Q86V35 215 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 HACE1Q8IYU2 909 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 LRRC43Q8N309 656 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 RASSF8Q8NHQ8 419 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 C1orf216Q8TAB5 229 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 DEPTORQ8TB45 409 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 ATXN2LQ8WWM7 1075 aaKnown RBP8.14□□□□□ -1.11
CPSF7-224ENST00000544990 CCDC51Q96ER9 411 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 CASD1Q96PB1 797 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 MMTAG2Q9BU76 263 aaKnown RBP8.14□□□□□ -1.11
CPSF7-224ENST00000544990 TIPINQ9BVW5 301 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 TRIM6Q9C030 488 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-224ENST00000544990 UBN1Q9NPG3 1134 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 GPRC5CQ9NQ84 441 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.14□□□□□ -1.11
CPSF7-224ENST00000544990 TYW1Q9NV66 732 aaKnown RBP8.14□□□□□ -1.11
CPSF7-224ENST00000544990 PRMT7Q9NVM4 692 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-224ENST00000544990 THEGQ9P2T0 379 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 KCNG1Q9UIX4 513 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 COG5Q9UP83 839 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 MTMR6Q9Y217 621 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 PCDHB2Q9Y5E7 798 aa8.14□□□□□ -1.11
CPSF7-224ENST00000544990 CNTNAP2Q9UHC6 1331 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 TMEM229AB2RXF0 380 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 TNFRSF10AO00220 468 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 GRM6O15303 877 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 TSPAN1O60635 241 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 ZIC2O95409 532 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 SSBP05455 408 aaKnown RBP eCLIP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 ITGA4P13612 1032 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 ATF7P17544 494 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 HOXA11P31270 313 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 UBE3AQ05086 875 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 RNASELQ05823 741 aaKnown RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 MAPK6Q16659 721 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 RINT1Q6NUQ1 792 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 MRPL10Q7Z7H8 261 aaKnown RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 THNSL1Q8IYQ7 743 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 SYT2Q8N9I0 419 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 KLHL23Q8NBE8 558 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 COLGALT1Q8NBJ5 622 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 URGCPQ8TCY9 931 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 HELQQ8TDG4 1101 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 PPP2R3CQ969Q6 453 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 CPB2Q96IY4 423 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 DRC1Q96MC2 740 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 ZNF396Q96N95 335 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 ZNF558Q96NG5 402 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 CSRNP2Q9H175 543 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 CWH43Q9H720 699 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 C17orf75Q9HAS0 396 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 ALG13Q9NP73 1137 aaKnown RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 KCND2Q9NZV8 630 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 KANSL3Q9P2N6 904 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 PUF60Q9UHX1 559 aaKnown RBP8.13□□□□□ -1.11
CPSF7-224ENST00000544990 PLAGL2Q9UPG8 496 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 CLIC4Q9Y696 253 aa8.13□□□□□ -1.11
CPSF7-224ENST00000544990 PHLPP2Q6ZVD8 1323 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 MYH15Q9Y2K3 1946 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 CCDC169A6NNP5 214 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 K7ERI5 159 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 NCK2O43639 380 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 OFD1O75665 1012 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 FGF18O76093 207 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 ITGB1P05556 798 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 ADH1AP07327 375 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PLA2G4BP0C869 781 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 ARF4P18085 180 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 NCLP19338 710 aaKnown RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PPM1AP35813 382 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 TXLNAP40222 546 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 ALDH7A1P49419 539 aaKnown RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 EFNA5P52803 228 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 SMTNP53814 917 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 PEX3P56589 373 aa8.12□□□□□ -1.11
CPSF7-224ENST00000544990 MRPS5P82675 430 aaKnown RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 CEBPZQ03701 1054 aaKnown RBP8.12□□□□□ -1.11
CPSF7-224ENST00000544990 KRT17Q04695 432 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms