RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 ZNF445P59923 1031 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 WDR5P61964 334 aaKnown RBP14.28□□□□□ -0.12
DDX11-227ENST00000544652 MLLT1Q03111 559 aaPredicted RBP14.28□□□□□ -0.12
DDX11-227ENST00000544652 KYAT1Q16773 422 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 KLHL10Q6JEL2 608 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 CRELD2Q6UXH1 353 aaPredicted RBP14.28□□□□□ -0.12
DDX11-227ENST00000544652 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
DDX11-227ENST00000544652 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
DDX11-227ENST00000544652 ZBTB33Q86T24 672 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 CEP120Q8N960 986 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 TSG101Q99816 390 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 DUSP9Q99956 384 aaKnown RBP14.28□□□□□ -0.12
DDX11-227ENST00000544652 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 HSPBP1Q9NZL4 362 aa14.28□□□□□ -0.12
DDX11-227ENST00000544652 CPSF3Q9UKF6 684 aaKnown RBP14.28□□□□□ -0.12
DDX11-227ENST00000544652 EXTL3O43909 919 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 ADRB2P07550 413 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 RPL13P26373 211 aaKnown RBP14.27□□□□□ -0.13
DDX11-227ENST00000544652 BMP8BP34820 402 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 FKBP3Q00688 224 aaKnown RBP14.27□□□□□ -0.13
DDX11-227ENST00000544652 ANO6Q4KMQ2 910 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 LRSAM1Q6UWE0 723 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 OTOP2Q7RTS6 562 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 GPD1LQ8N335 351 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 TOP1MTQ969P6 601 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 BPIFA3Q9BQP9 254 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 TRIM6Q9C030 488 aaPredicted RBP14.27□□□□□ -0.13
DDX11-227ENST00000544652 DNAJC25Q9H1X3 360 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 NXF3Q9H4D5 531 aaKnown RBP14.27□□□□□ -0.13
DDX11-227ENST00000544652 PCIF1Q9H4Z3 704 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 KIAA1586Q9HCI6 787 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 TMEM161AQ9NX61 479 aa14.27□□□□□ -0.13
DDX11-227ENST00000544652 MAPK13O15264 365 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 INPPL1O15357 1258 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 AMHP03971 560 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 NR2F2P24468 414 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 TNFSF9P41273 254 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX11-227ENST00000544652 STX17P56962 302 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 MCCD1P59942 119 aaPredicted RBP14.26□□□□□ -0.13
DDX11-227ENST00000544652 DEFB103AP81534 67 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 HSP90AA2PQ14568 343 aaPredicted RBP14.26□□□□□ -0.13
DDX11-227ENST00000544652 ZBTB41Q5SVQ8 909 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 AGMOQ6ZNB7 445 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 LRRC55Q6ZSA7 311 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 NPAS4Q8IUM7 802 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 THNSL1Q8IYQ7 743 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 HACE1Q8IYU2 909 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 ZSWIM2Q8NEG5 633 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 ENOX1Q8TC92 643 aaKnown RBP14.26□□□□□ -0.13
DDX11-227ENST00000544652 PGBD4Q96DM1 585 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 MKNK1Q9BUB5 465 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 SNTG2Q9NY99 539 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 HES2Q9Y543 173 aa14.26□□□□□ -0.13
DDX11-227ENST00000544652 MEIS3P2A8K0S8 358 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 MEFVO15553 781 aaPredicted RBP14.25□□□□□ -0.13
DDX11-227ENST00000544652 CAVIN2O95810 425 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 CLTAP09496 248 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 STAG3L1P0CL83 205 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
DDX11-227ENST00000544652 ITGA4P13612 1032 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 ACOT2P49753 483 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 ADAM9Q13443 819 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 SEZ6Q53EL9 994 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 XKR4Q5GH76 650 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 ALKAL1Q6UXT8 129 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 TMEM192Q8IY95 271 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 PHOSPHO2Q8TCD6 241 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 SAAL1Q96ER3 474 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 CEP63Q96MT8 703 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 ACAP3Q96P50 834 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 SLC9A7Q96T83 725 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 FAM213AQ9BRX8 229 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 CCDC94Q9BW85 323 aaPredicted RBP14.25□□□□□ -0.13
DDX11-227ENST00000544652 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
DDX11-227ENST00000544652 GZF1Q9H116 711 aaPredicted RBP14.25□□□□□ -0.13
DDX11-227ENST00000544652 MTIF3Q9H2K0 278 aaKnown RBP14.25□□□□□ -0.13
DDX11-227ENST00000544652 PRO3102Q9H379 93 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 UBN1Q9NPG3 1134 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 RNF19AQ9NV58 838 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 CXXC1Q9P0U4 656 aaPredicted RBP14.25□□□□□ -0.13
DDX11-227ENST00000544652 GIT1Q9Y2X7 761 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 PCDHB7Q9Y5E2 793 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 SCN1AP35498 2009 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 PDE4DIPQ5VU43 2346 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 PLXNA4Q9HCM2 1894 aa14.25□□□□□ -0.13
DDX11-227ENST00000544652 TTC26A0AVF1 554 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 GOLGA8IPA6NC78 632 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 GOLGA8JA6NMD2 632 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 CETN3O15182 167 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 EXOC3O60645 756 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 RECQL4O94761 1208 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 KCNJ6P48051 423 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 CASP4P49662 377 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 CYP2J2P51589 502 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 ENPEPQ07075 957 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 SHHQ15465 462 aa14.24□□□□□ -0.13
DDX11-227ENST00000544652 ENOX2Q16206 610 aaKnown RBP14.24□□□□□ -0.13
DDX11-227ENST00000544652 SNRNP35Q16560 246 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms