RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 NASPP49321 788 aaPredicted RBP25.53■■□□□ 1.68
CHFR-222ENST00000544093 CEBPZQ03701 1054 aaKnown RBP25.53■■□□□ 1.68
CHFR-222ENST00000544093 ZNF568Q3ZCX4 644 aa25.53■■□□□ 1.68
CHFR-222ENST00000544093 ADHFE1Q8IWW8 467 aa25.53■■□□□ 1.68
CHFR-222ENST00000544093 GJD3Q8N144 294 aa25.53■■□□□ 1.68
CHFR-222ENST00000544093 KRI1Q8N9T8 703 aaKnown RBP25.53■■□□□ 1.68
CHFR-222ENST00000544093 VN1R2Q8NFZ6 395 aa25.53■■□□□ 1.68
CHFR-222ENST00000544093 ZNF396Q96N95 335 aaPredicted RBP25.53■■□□□ 1.68
CHFR-222ENST00000544093 REEP2Q9BRK0 252 aa25.53■■□□□ 1.68
CHFR-222ENST00000544093 VN1R3Q9BXE9 311 aa25.53■■□□□ 1.68
CHFR-222ENST00000544093 PTPRHQ9HD43 1115 aa25.53■■□□□ 1.68
CHFR-222ENST00000544093 CLASP2O75122 1294 aaKnown RBP25.52■■□□□ 1.68
CHFR-222ENST00000544093 URODP06132 367 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 MAPTP10636 758 aaKnown RBP25.52■■□□□ 1.68
CHFR-222ENST00000544093 MCF2P10911 925 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 ZNF131P52739 623 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 YARSP54577 528 aaKnown RBP25.52■■□□□ 1.68
CHFR-222ENST00000544093 PTPN14Q15678 1187 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 ANKRD54Q6NXT1 300 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 MPZL3Q6UWV2 235 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 ZPBP2Q6X784 338 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 TAS1R3Q7RTX0 852 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 EPSTI1Q96J88 318 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 TCHPQ9BT92 498 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 HERC2P3Q9BVR0 1158 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 CCDC94Q9BW85 323 aaPredicted RBP25.52■■□□□ 1.68
CHFR-222ENST00000544093 PARVGQ9HBI0 331 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 USP20Q9Y2K6 914 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 HCFC2Q9Y5Z7 792 aa25.52■■□□□ 1.68
CHFR-222ENST00000544093 TBCAO75347 108 aaKnown RBP25.51■■□□□ 1.67
CHFR-222ENST00000544093 TOM1L1O75674 476 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 FAM13AO94988 1023 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 BRD1O95696 1058 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 PROZP22891 400 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 SSTR3P32745 418 aaPredicted RBP25.51■■□□□ 1.67
CHFR-222ENST00000544093 GRM5P41594 1212 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 NCKAP1LP55160 1127 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 ZP2Q05996 745 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 DHX8Q14562 1220 aaKnown RBP25.51■■□□□ 1.67
CHFR-222ENST00000544093 MCM6Q14566 821 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 TPRNQ4KMQ1 711 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 GPR65Q8IYL9 337 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 RNF168Q8IYW5 571 aaPredicted RBP25.51■■□□□ 1.67
CHFR-222ENST00000544093 TARS2Q9BW92 718 aaKnown RBP25.51■■□□□ 1.67
CHFR-222ENST00000544093 DZANK1Q9NVP4 752 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 ADAM28Q9UKQ2 775 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 GDAQ9Y2T3 454 aa25.51■■□□□ 1.67
CHFR-222ENST00000544093 EFEMP2O95967 443 aa25.5■■□□□ 1.67
CHFR-222ENST00000544093 HSP90AA2PQ14568 343 aaPredicted RBP25.5■■□□□ 1.67
CHFR-222ENST00000544093 STK38Q15208 465 aa25.5■■□□□ 1.67
CHFR-222ENST00000544093 RRAGBQ5VZM2 374 aa25.5■■□□□ 1.67
CHFR-222ENST00000544093 LLGL2Q6P1M3 1020 aa25.5■■□□□ 1.67
CHFR-222ENST00000544093 CCDC73Q6ZRK6 1079 aa25.5■■□□□ 1.67
CHFR-222ENST00000544093 CDT1Q9H211 546 aa25.5■■□□□ 1.67
CHFR-222ENST00000544093 C5orf42Q9H799 3197 aa25.5■■□□□ 1.67
CHFR-222ENST00000544093 NPHP3-ACAD11A0A0J9YXS1 232 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 PTGESO14684 152 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 GLUD2P49448 558 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 SPECC1Q5M775 1068 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 KIAA1841Q6NSI8 718 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 HAUS6Q7Z4H7 955 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 MYCT1Q8N699 235 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 AUTS2Q8WXX7 1259 aa25.49■■□□□ 1.67
CHFR-222ENST00000544093 USP15Q9Y4E8 981 aaPredicted RBP25.49■■□□□ 1.67
CHFR-222ENST00000544093 CITO14578 2027 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 SF3B1O75533 1304 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHFR-222ENST00000544093 C19orf67A6NJJ6 358 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 LILRB3O75022 631 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 PPP6R2O75170 966 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 TADA2AO75478 443 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 ZSCAN22P10073 491 aaPredicted RBP25.48■■□□□ 1.67
CHFR-222ENST00000544093 RBM10P98175 930 aaKnown RBP25.48■■□□□ 1.67
CHFR-222ENST00000544093 CACNB1Q02641 598 aaPredicted RBP25.48■■□□□ 1.67
CHFR-222ENST00000544093 CREMQ03060 361 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 ITIH3Q06033 890 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 USP49Q70CQ1 688 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 LINC00301Q8NCQ3 95 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 LRRC15Q8TF66 581 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 CLIC6Q96NY7 704 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 ACAP3Q96P50 834 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 SLC38A7Q9NVC3 462 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 DPP7Q9UHL4 492 aa25.48■■□□□ 1.67
CHFR-222ENST00000544093 TRIP11Q15643 1979 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 SPTLC2O15270 562 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 TRAK2O60296 914 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 YEATS4O95619 227 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 ADH1AP07327 375 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 DSG1Q02413 1049 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 ELAVL2Q12926 359 aaKnown RBP25.47■■□□□ 1.67
CHFR-222ENST00000544093 NOLC1Q14978 699 aaKnown RBP eCLIP25.47■■□□□ 1.67
CHFR-222ENST00000544093 USP41Q3LFD5 358 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 ATL3Q6DD88 541 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 CES5AQ6NT32 575 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 FUT10Q6P4F1 479 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 ELMSAN1Q6PJG2 1045 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 SUSD6Q92537 303 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 UROC1Q96N76 676 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.47■■□□□ 1.67
CHFR-222ENST00000544093 CHST7Q9NS84 486 aa25.47■■□□□ 1.67
CHFR-222ENST00000544093 K7ENM7 598 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms