RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SURF1Q15526 300 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 HSP90AA4PQ58FG1 418 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 TCERG1LQ5VWI1 586 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 LRRC55Q6ZSA7 311 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 INTS8Q75QN2 995 aaKnown RBP12.94□□□□□ -0.34
DDB1-223ENST00000543658 ZC3H3Q8IXZ2 948 aaKnown RBP12.94□□□□□ -0.34
DDB1-223ENST00000543658 RNF169Q8NCN4 708 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 BADQ92934 168 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 FAM212AQ96EL1 285 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 EEF2KMTQ96G04 330 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 ACAP3Q96P50 834 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 PTPRHQ9HD43 1115 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 IL23AQ9NPF7 189 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 DMAC2Q9NW81 257 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 ARMCX3Q9UH62 379 aaPredicted RBP12.94□□□□□ -0.34
DDB1-223ENST00000543658 IPPQ9Y573 584 aa12.94□□□□□ -0.34
DDB1-223ENST00000543658 GOLGA6L3A6NEY3 463 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 PES1O00541 588 aaKnown RBP12.93□□□□□ -0.34
DDB1-223ENST00000543658 ABLIM1O14639 778 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 MAPK13O15264 365 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 MGEA5O60502 916 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 IL18RAPO95256 599 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 EEF1GP26641 437 aaKnown RBP12.93□□□□□ -0.34
DDB1-223ENST00000543658 KCNJ6P48051 423 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 CASP4P49662 377 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 KCNJ12Q14500 433 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 DSC3Q14574 896 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 SEZ6Q53EL9 994 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 DCAF17Q5H9S7 520 aaPredicted RBP12.93□□□□□ -0.34
DDB1-223ENST00000543658 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
DDB1-223ENST00000543658 SLC24A5Q71RS6 500 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 TMEM174Q8WUU8 243 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 OSBPL7Q9BZF2 842 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 HAPLN2Q9GZV7 340 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 MTIF3Q9H2K0 278 aaKnown RBP12.93□□□□□ -0.34
DDB1-223ENST00000543658 TMX1Q9H3N1 280 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 NXF3Q9H4D5 531 aaKnown RBP12.93□□□□□ -0.34
DDB1-223ENST00000543658 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 SAMSN1Q9NSI8 373 aaKnown RBP12.93□□□□□ -0.34
DDB1-223ENST00000543658 SNTG2Q9NY99 539 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 PCDHB2Q9Y5E7 798 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 TTC3P53804 2025 aa12.93□□□□□ -0.34
DDB1-223ENST00000543658 A0A0U1RQF3 1178 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 ZBBXA8MT70 800 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 STX10O60499 249 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 AKAP3O75969 853 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 SERPINC1P01008 464 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 AMHP03971 560 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 CXCL8P10145 99 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 PRKCSHP14314 528 aaPredicted RBP12.92□□□□□ -0.34
DDB1-223ENST00000543658 ITGB8P26012 769 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 TNFSF9P41273 254 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 BFSP1Q12934 665 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 NCAPHQ15003 741 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 FILIP1LQ4L180 1135 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 FNDC1Q4ZHG4 1894 aaPredicted RBP12.92□□□□□ -0.34
DDB1-223ENST00000543658 UBXN11Q5T124 520 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 GAS2L3Q86XJ1 694 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 ECHDC2Q86YB7 292 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 BRSK2Q8IWQ3 736 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 CD302Q8IX05 232 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 CEP120Q8N960 986 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 FBXL18Q96ME1 805 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 MED15Q96RN5 788 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 TRAIPQ9BWF2 469 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 RBSNQ9H1K0 784 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
DDB1-223ENST00000543658 UBN1Q9NPG3 1134 aa12.92□□□□□ -0.34
DDB1-223ENST00000543658 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
DDB1-223ENST00000543658 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDB1-223ENST00000543658 HOXA2O43364 376 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 XPOTO43592 962 aaKnown RBP12.91□□□□□ -0.34
DDB1-223ENST00000543658 RECQL4O94761 1208 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 EOMESO95936 686 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 FGBP02675 491 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 TPM3P06753 285 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 ADRB2P07550 413 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 TMEM191BP0C7N4 346 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 ACRP10323 421 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 DLATP10515 647 aaKnown RBP12.91□□□□□ -0.34
DDB1-223ENST00000543658 VAMP7P51809 220 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
DDB1-223ENST00000543658 CYP24A1Q07973 514 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 GPNMBQ14956 572 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 MAN2A1Q16706 1144 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 UVSSAQ2YD98 709 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 TCP11X2Q5H9J9 407 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 CDKAL1Q5VV42 579 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 ABI1Q8IZP0 508 aa12.91□□□□□ -0.34
DDB1-223ENST00000543658 RSAD1Q9HA92 442 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms