RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 NPLOC4Q8TAT6 608 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 SECISBP2LQ93073 1101 aaKnown RBP8.59□□□□□ -1.03
TRIM59-208ENST00000543469 RUNDC3BQ96NL0 473 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 UPF3AQ9H1J1 476 aaKnown RBP8.59□□□□□ -1.03
TRIM59-208ENST00000543469 SETD4Q9NVD3 440 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 FBXL5Q9UKA1 691 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 PCDHB7Q9Y5E2 793 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 RSPH10B2B2RC85 870 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 H7C4K7 107 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 RSPH10BP0C881 870 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 CLCN3P51790 818 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 CREMQ03060 361 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 CCDC122Q5T0U0 273 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 RHOT2Q8IXI1 618 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 APPL2Q8NEU8 664 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 NAP1L5Q96NT1 182 aaPredicted RBP8.59□□□□□ -1.03
TRIM59-208ENST00000543469 UBE2TQ9NPD8 197 aaPredicted RBP8.59□□□□□ -1.03
TRIM59-208ENST00000543469 APEX2Q9UBZ4 518 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 DNAJC12Q9UKB3 198 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 MTUS1Q9ULD2 1270 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 UMODL1Q5DID0 1318 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 A0A087X0B3 334 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 TRIM49BA6NDI0 452 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 THAP12O43422 761 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 SNAI1O95863 264 aaPredicted RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 SSR1P43307 286 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 ARHGAP44Q17R89 818 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 TAPT1Q6NXT6 567 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 LRRC8AQ8IWT6 810 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 TMEM199Q8N511 208 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 RNF169Q8NCN4 708 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 PPP2R3CQ969Q6 453 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 IFIH1Q9BYX4 1025 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 WDR35Q9P2L0 1181 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 ARHGAP28Q9P2N2 729 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 EPN1Q9Y6I3 576 aaPredicted RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 PMM2O15305 246 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 PFKMP08237 780 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 FAM163BP0C2L3 166 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 TNNT1P13805 278 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 EIF4BP23588 611 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 PCSK1P29120 753 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 TMEM35BQ8NCS4 154 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 KIAA0895Q8NCT3 520 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 TARS2Q9BW92 718 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 DONSONQ9NYP3 566 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 NR2E3Q9Y5X4 410 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 BAZ2BQ9UIF8 2168 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 LRRC10BA6NIK2 292 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 DNM1LO00429 736 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 AMHP03971 560 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 CYBAP13498 195 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 GRM5P41594 1212 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 CDR1P51861 262 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 ITGA7Q13683 1181 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 ENOX2Q16206 610 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 HADHQ16836 314 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 MAP9Q49MG5 647 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 SEL1L2Q5TEA6 688 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 CCDC117Q8IWD4 279 aaPredicted RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 TRIM59Q8IWR1 403 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 APOL6Q9BWW8 343 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 NIF3L1Q9GZT8 377 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 CCDC113Q9H0I3 377 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 RAB20Q9NX57 234 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 RASAL2Q9UJF2 1139 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 INTUQ9ULD6 942 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 GIT1Q9Y2X7 761 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 C2CD2Q9Y426 696 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 A0A087WZ62 844 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 ZNF18P17022 549 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 CASP1P29466 404 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 SOX5P35711 763 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 GNG11P61952 73 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 SMC1AQ14683 1233 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 B3GNT9Q6UX72 402 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 GAS2L3Q86XJ1 694 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 DCP1BQ8IZD4 617 aaKnown RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 ADGRA2Q96PE1 1338 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 FDXACB1Q9BRP7 624 aaPredicted RBP8.58□□□□□ -1.04
TRIM59-208ENST00000543469 MED10Q9BTT4 135 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 NLRC4Q9NPP4 1024 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 RNF14Q9UBS8 474 aa8.58□□□□□ -1.04
TRIM59-208ENST00000543469 GOLGA8IPA6NC78 632 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 GOLGA8JA6NMD2 632 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 NPTXRO95502 500 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 TAF6P49848 677 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 FMR1Q06787 632 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM59-208ENST00000543469 MOGSQ13724 837 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 SND1Q7KZF4 910 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRIM59-208ENST00000543469 CCAR2Q8N163 923 aaKnown RBP8.57□□□□□ -1.04
TRIM59-208ENST00000543469 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.57□□□□□ -1.04
TRIM59-208ENST00000543469 SPATA18Q8TC71 538 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 PDGFCQ9NRA1 345 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 EIF3CLB5ME19 914 aaKnown RBP8.57□□□□□ -1.04
TRIM59-208ENST00000543469 NEBLO76041 1014 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 CYP3A5P20815 502 aa8.57□□□□□ -1.04
TRIM59-208ENST00000543469 CASP14P31944 242 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms