RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 NME3Q13232 169 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 DRAP1Q14919 205 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 IFT43Q96FT9 208 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 AP1M1Q9BXS5 423 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 TRPA1O75762 1119 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 YY1P25490 414 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 PCSK1P29120 753 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ACTR2P61160 394 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 CACNB2Q08289 660 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 BBS9Q3SYG4 887 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ZNF746Q6NUN9 644 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 GBP7Q8N8V2 638 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 TTC13Q8NBP0 860 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 TMC2Q8TDI7 906 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 RSPH1Q8WYR4 309 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ASIC4Q96FT7 647 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ZNF512Q96ME7 567 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 TRIM9Q9C026 710 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 KLC2Q9H0B6 622 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 HSPBP1Q9NZL4 362 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 HEY1Q9Y5J3 304 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ADGRB1O14514 1584 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 SLIT1O75093 1534 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 CNTNAP5Q8WYK1 1306 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 MIF4GDA9UHW6 222 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 KIF1CO43896 1103 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 PPFIA4O75335 1185 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ZWINTO95229 277 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 RPLP2P05387 115 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 HOXA10P31260 410 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 MNAT1P51948 309 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ASPHQ12797 758 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 STILQ15468 1287 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ARMC3Q5W041 872 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 NT5DC4Q86YG4 428 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 EGFL6Q8IUX8 553 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 DCP1BQ8IZD4 617 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 RSRC1Q96IZ7 334 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 PANX2Q96RD6 677 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 SPATC1LQ9H0A9 340 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 SP110Q9HB58 689 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ANKEF1Q9NU02 776 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 PRG3Q9Y2Y8 225 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM205AQ6ZU69 1335 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 FGFR2P21802 821 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 FMR1NBQ8N0W7 255 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ARHGEF2Q92974 986 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 LRGUKQ96M69 825 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 REEP2Q9BRK0 252 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ABCF3Q9NUQ8 709 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 PCSK1NQ9UHG2 260 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 ATP11BQ9Y2G3 1177 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 TMEM131LA2VDJ0 1609 aa7.33□□□□□ -1.24
SRGAP1-206ENST00000543397 IGSF9BQ9UPX0 1349 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM205CA6NFA0 338 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 TRIM64A6NGJ6 449 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 TRIM64BA6NI03 449 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 MFAP3LO75121 409 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 PAMP19021 973 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 CXCR5P32302 372 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 MSH2P43246 934 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 ANTXR2P58335 489 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 FBXO16Q8IX29 292 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 TEX19Q8NA77 164 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 HELQQ8TDG4 1101 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM210AQ96ND0 272 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SEPT5Q99719 369 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 MMTAG2Q9BU76 263 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 NRBP1Q9UHY1 535 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 TUBE1Q9UJT0 475 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 KIAA1210Q9ULL0 1709 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 GPR182O15218 404 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 STRNO43815 780 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 KRT7P08729 469 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 RPA1P27694 616 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 GEMIN4P57678 1058 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 ST8SIA6P61647 398 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 FRMD5Q7Z6J6 570 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SAMD3Q8N6K7 520 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM71BQ8TC56 605 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 CDCA5Q96FF9 252 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 GMCL1Q96IK5 515 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 LRRC53A6NM62 1247 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 IL18RAPO95256 599 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 NPEPPSP55786 919 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 KCNB1Q14721 858 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SNX17Q15036 470 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 TRIP13Q15645 432 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 MGAT5BQ3V5L5 792 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 TMTC4Q5T4D3 741 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 C3orf67Q6ZVT6 689 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 ARPC5LQ9BPX5 153 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 CCDC160A6NGH7 325 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 PRR29P0C7W0 189 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 LCP1P13796 627 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 TROAPQ12815 778 aa7.32□□□□□ -1.24
SRGAP1-206ENST00000543397 SV2CQ496J9 727 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms