RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 C17orf75Q9HAS0 396 aa14.43□□□□□ -0.1
TNFRSF1A-215ENST00000543359 BLOC1S4Q9NUP1 217 aa14.43□□□□□ -0.1
TNFRSF1A-215ENST00000543359 DAXXQ9UER7 740 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF1A-215ENST00000543359 MYH11P35749 1972 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 MYO10Q9HD67 2058 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 SYT1P21579 422 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 IGFBP6P24592 240 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CA8P35219 290 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 RAD51AP2Q09MP3 1159 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 RESTQ13127 1097 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 DMP1Q13316 513 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 TUSC3Q13454 348 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PTPAQ15257 358 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 SF3A1Q15459 793 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 DCAF4L1Q3SXM0 396 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 XKR4Q5GH76 650 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 ALKAL1Q6UXT8 129 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CABP7Q86V35 215 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PPFIBP1Q86W92 1011 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 GPR65Q8IYL9 337 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CEP120Q8N960 986 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 TMEM161BQ8NDZ6 487 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 KCNN1Q92952 543 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 B3GALT6Q96L58 329 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PPP1R10Q96QC0 940 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 ADPGKQ9BRR6 497 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 TARS2Q9BW92 718 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 MRPL17Q9NRX2 175 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 DZANK1Q9NVP4 752 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 ADAM28Q9UKQ2 775 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 RBM19Q9Y4C8 960 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 ZDBF2Q9HCK1 2354 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PHLPP2Q6ZVD8 1323 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 ZNF318Q5VUA4 2279 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 DMDP11532 3685 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 NPHP3-ACAD11A0A0J9YXS1 232 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PRR33A8MZF0 331 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 C2CD2LO14523 706 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 TEX28O15482 410 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 MEFVO15553 781 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 NR1I2O75469 434 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PAPLNO95428 1278 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 BRD1O95696 1058 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 BMP15O95972 392 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 THP07101 528 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 WEE2P0C1S8 567 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 MAPTP10636 758 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PLS3P13797 630 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 PDCP20941 246 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 GLUD2P49448 558 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 HSP90AA2PQ14568 343 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 RARS2Q5T160 578 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 FUT10Q6P4F1 479 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CD300LGQ6UXG3 332 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 FBXL18Q96ME1 805 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 NECTIN4Q96NY8 510 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 EMILIN2Q9BXX0 1053 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 MRPL4Q9BYD3 311 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CDT1Q9H211 546 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 POMKQ9H5K3 350 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 KMT5AQ9NQR1 393 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 KCND2Q9NZV8 630 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 GDAQ9Y2T3 454 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CLIC4Q9Y696 253 aa14.41□□□□□ -0.1
TNFRSF1A-215ENST00000543359 VPS37CA5D8V6 355 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CASTOR2A6NHX0 329 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 SLC16A4O15374 487 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 KIF4AO95239 1232 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 URODP06132 367 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 KLRC2P26717 231 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 LONP1P36776 959 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 UBA7P41226 1012 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 GRM5P41594 1212 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 TMEM132AQ24JP5 1023 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 KIAA1841Q6NSI8 718 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 CES5AQ6NT32 575 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 FAM173BQ6P4H8 233 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 LILRA6Q6PI73 481 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 USP49Q70CQ1 688 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 GPR149Q86SP6 731 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 EDAQ92838 391 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 ZBTB45Q96K62 511 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 MTMR6Q9Y217 621 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 SSX2IPQ9Y2D8 614 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 C2orf16Q68DN1 1984 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 WDR87Q6ZQQ6 2873 aa14.4□□□□□ -0.1
TNFRSF1A-215ENST00000543359 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MTCL1Q9Y4B5 1905 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 TADA2AO75478 443 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 C1RP00736 705 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 PLCG1P19174 1290 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 MTHFRP42898 656 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 ZNF131P52739 623 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 KARSQ15046 597 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 USP41Q3LFD5 358 aa14.39□□□□□ -0.11
TNFRSF1A-215ENST00000543359 RTP2Q5QGT7 225 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms