RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 AGMOQ6ZNB7 445 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 SLC9A9Q8IVB4 645 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 TDHQ8IZJ6 230 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 LPPQ93052 612 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 ACAP3Q96P50 834 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 APOL6Q9BWW8 343 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 PARP2Q9UGN5 583 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 GIT1Q9Y2X7 761 aa18.67■□□□□ 0.58
LIG1-204ENST00000542460 EXTL3O43909 919 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 GJB5O95377 273 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 NR3C1P04150 777 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 PMS1P54277 932 aaKnown RBP18.66■□□□□ 0.58
LIG1-204ENST00000542460 POU5F1Q01860 360 aaKnown RBP18.66■□□□□ 0.58
LIG1-204ENST00000542460 TYRO3Q06418 890 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 SEZ6Q53EL9 994 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 ANKRD40Q6AI12 368 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 HERC6Q8IVU3 1022 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 GPD1LQ8N335 351 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 XXYLT1Q8NBI6 393 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 SAAL1Q96ER3 474 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 RSAD1Q9HA92 442 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 KIAA1586Q9HCI6 787 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 TOPORSQ9NS56 1045 aaPredicted RBP18.66■□□□□ 0.58
LIG1-204ENST00000542460 DMAC2Q9NW81 257 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 RWDD2AQ9UIY3 292 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 CPSF3Q9UKF6 684 aaKnown RBP18.66■□□□□ 0.58
LIG1-204ENST00000542460 CTNND2Q9UQB3 1225 aa18.66■□□□□ 0.58
LIG1-204ENST00000542460 MEIS3P2A8K0S8 358 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 DGKIO75912 1065 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 CCDC192P0DO97 292 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 FGFR1P11362 822 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 NR2F2P24468 414 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 ERCC5P28715 1186 aaPredicted RBP18.65■□□□□ 0.58
LIG1-204ENST00000542460 TNFSF9P41273 254 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 ACOT2P49753 483 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 CYP2J2P51589 502 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 ADAM9Q13443 819 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 ZBTB41Q5SVQ8 909 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 GLB1LQ6UWU2 654 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 TMCO2Q7Z6W1 182 aaPredicted RBP18.65■□□□□ 0.58
LIG1-204ENST00000542460 TMEM192Q8IY95 271 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 RSPH1Q8WYR4 309 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 FBXL18Q96ME1 805 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 FAM213AQ9BRX8 229 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 ZBED2Q9BTP6 218 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 MICAL3Q7RTP6 2002 aa18.65■□□□□ 0.58
LIG1-204ENST00000542460 GOLGA8IPA6NC78 632 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 TRIM49BA6NDI0 452 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 GOLGA8JA6NMD2 632 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 EXOC3O60645 756 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 RECQL4O94761 1208 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 FKBP3Q00688 224 aaKnown RBP18.64■□□□□ 0.58
LIG1-204ENST00000542460 TTI2Q6NXR4 508 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 FAM117BQ6P1L5 589 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 CRELD2Q6UXH1 353 aaPredicted RBP18.64■□□□□ 0.58
LIG1-204ENST00000542460 ABI1Q8IZP0 508 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 ZSWIM2Q8NEG5 633 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 RPF1Q9H9Y2 349 aaKnown RBP18.64■□□□□ 0.58
LIG1-204ENST00000542460 RNF19AQ9NV58 838 aa18.64■□□□□ 0.58
LIG1-204ENST00000542460 ARL5CA6NH57 179 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 OFD1O75665 1012 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 STX17P56962 302 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 CLLU1OSQ5K130 101 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 HELQQ8TDG4 1101 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 NOC3LQ8WTT2 800 aaKnown RBP18.64■□□□□ 0.57
LIG1-204ENST00000542460 RAD9AQ99638 391 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 TMEM117Q9H0C3 514 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 PLEKHA5Q9HAU0 1116 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 TTC3P53804 2025 aa18.64■□□□□ 0.57
LIG1-204ENST00000542460 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.63■□□□□ 0.57
LIG1-204ENST00000542460 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.63■□□□□ 0.57
LIG1-204ENST00000542460 ZNF233A6NK53 670 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 CETN3O15182 167 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 INPPL1O15357 1258 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 CXCL8P10145 99 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 MLH1P40692 756 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
LIG1-204ENST00000542460 ENOX2Q16206 610 aaKnown RBP18.63■□□□□ 0.57
LIG1-204ENST00000542460 SNRNP35Q16560 246 aaKnown RBP18.63■□□□□ 0.57
LIG1-204ENST00000542460 SLC10A6Q3KNW5 377 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 ALKAL1Q6UXT8 129 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 CD302Q8IX05 232 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 RDH13Q8NBN7 331 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 ZNF689Q96CS4 500 aaPredicted RBP18.63■□□□□ 0.57
LIG1-204ENST00000542460 YME1L1Q96TA2 773 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 GAD1Q99259 594 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 DUSP9Q99956 384 aaKnown RBP18.63■□□□□ 0.57
LIG1-204ENST00000542460 FUCA2Q9BTY2 467 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 KLK14Q9P0G3 267 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 FRMD4BQ9Y2L6 1034 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 INSL6Q9Y581 213 aa18.63■□□□□ 0.57
LIG1-204ENST00000542460 TTC26A0AVF1 554 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 TLL1O43897 1013 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 ADRB2P07550 413 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 PPP2R3AQ06190 1150 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 NOMO2Q5JPE7 1267 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 CEP135Q66GS9 1140 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 BRSK2Q8IWQ3 736 aa18.62■□□□□ 0.57
LIG1-204ENST00000542460 ZC3H3Q8IXZ2 948 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms