RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 TCHPQ9BT92 498 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 EHMT1Q9H9B1 1298 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 AS3MTQ9HBK9 375 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 ZNF304Q9HCX3 659 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 AASDHPPTQ9NRN7 309 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 PANK4Q9NVE7 773 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 WRAP73Q9P2S5 460 aaPredicted RBP8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 AFG3L2Q9Y4W6 797 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 PTPRFP10586 1907 aa8.58□□□□□ -1.04
PDLIM5-221ENST00000542407 TTC26A0AVF1 554 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 RCCD1A6NED2 376 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 RASSF10A6NK89 507 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 SLITRK3O94933 977 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 FAM153BP0C7A2 387 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 ZNF16P17020 682 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 TMOD1P28289 359 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 MRPS9P82933 396 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 FAM153CQ494X1 144 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 C8orf74Q6P047 294 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 EMBQ6PCB8 327 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 CCBE1Q6UXH8 406 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 DLK2Q6UY11 383 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 NIPA1Q7RTP0 329 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 MB21D1Q8N884 522 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 SPATA4Q8NEY3 305 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 CNOT6LQ96LI5 555 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 STIM2Q9P246 746 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 FAM153AQ9UHL3 310 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 RABGAP1Q9Y3P9 1069 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 UBIAD1Q9Y5Z9 338 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 LCTP09848 1927 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 A0A1W2PQC6 194 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 TMEM88BA6NKF7 163 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 TBKBP1A7MCY6 615 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 DHX15O43143 795 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 USP2O75604 605 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 ATP6V1G2O95670 118 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 ALAS1P13196 640 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 DESP17661 470 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 HMGCS2P54868 508 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 CACNB1Q02641 598 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 DRP2Q13474 957 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 LRRC41Q15345 812 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 QPCTQ16769 361 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 FAM26FQ5R3K3 315 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 PCNX4Q63HM2 1172 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 BZW1Q7L1Q6 419 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 MCF2L2Q86YR7 1114 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 WDR75Q8IWA0 830 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 ZC3H3Q8IXZ2 948 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 CPXCR1Q8N123 301 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 RBM46Q8TBY0 533 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 HVCN1Q96D96 273 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 DTNBP1Q96EV8 351 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 SCYL1Q96KG9 808 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 TTYH3Q9C0H2 523 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 TUFT1Q9NNX1 390 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 TRPC6Q9Y210 931 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 RIPK3Q9Y572 518 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 ZHX2Q9Y6X8 837 aa8.57□□□□□ -1.04
PDLIM5-221ENST00000542407 POLR2AP24928 1970 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 GMNCA6NCL1 334 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 ZSCAN5CA6NGD5 496 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 ANP32DO95626 131 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 EYA4O95677 639 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 FDX1P10109 184 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 DSG3P32926 999 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 SCNN1AP37088 669 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 CARSP49589 748 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 KRT83P78385 493 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 CYP4A11Q02928 519 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 LRRC63Q05C16 580 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 IFFO1Q0D2I5 559 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 NFRKBQ6P4R8 1299 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 C6orf89Q6UWU4 347 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 EPM2AIP1Q7L775 607 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 CPLX4Q7Z7G2 160 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 CACNA2D3Q8IZS8 1091 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 SCFD1Q8WVM8 642 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 ERP27Q96DN0 273 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 EEF2KMTQ96G04 330 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 DYDC2Q96IM9 177 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 REEP2Q9BRK0 252 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 FAM167BQ9BTA0 163 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 RUSC1Q9BVN2 902 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 KCTD10Q9H3F6 313 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 ZNF214Q9UL59 606 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 SLC45A1Q9Y2W3 748 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 C19orf81C9J6K1 198 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 CYP1A2P05177 515 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 ARPC4P59998 168 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 RPS6P62753 249 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 GUCY2DQ02846 1103 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 KIF5AQ12840 1032 aa8.56□□□□□ -1.04
PDLIM5-221ENST00000542407 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms