RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 MRE11P49959 708 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 SLC5A3P53794 718 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 MRPS9P82933 396 aaKnown RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 FOXO4P98177 505 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 MAPK7Q13164 816 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 BECN1Q14457 450 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 PCSK7Q16549 785 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 KIZQ2M2Z5 673 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 ARL13BQ3SXY8 428 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 PARP10Q53GL7 1025 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 TOR2AQ5JU69 321 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 ARMC4Q5T2S8 1044 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 FIGNL1Q6PIW4 674 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 LYSMD3Q7Z3D4 306 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 MOGAT3Q86VF5 341 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 ARHGEF25Q86VW2 580 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 TTC30AQ86WT1 665 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 IQCA1Q86XH1 822 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 NPLOC4Q8TAT6 608 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 KLHDC4Q8TBB5 520 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 BAHD1Q8TBE0 780 aaPredicted RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 STT3BQ8TCJ2 826 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 CREB3L4Q8TEY5 395 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 COPS5Q92905 334 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 FBXW5Q969U6 566 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 RRP36Q96EU6 259 aaKnown RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 SPATA17Q96L03 361 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 GAS2L1Q99501 681 aaPredicted RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 ELF4Q99607 663 aaPredicted RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 PI4K2AQ9BTU6 479 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 EDEM3Q9BZQ6 932 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 ZC3H12CQ9C0D7 883 aaKnown RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 C2orf40Q9H1Z8 148 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 RUBCNLQ9H714 662 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 POLMQ9NP87 494 aaPredicted RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 OBP2BQ9NPH6 170 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 ZSWIM5Q9P217 1185 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 GDF2Q9UK05 429 aaPredicted RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 MKL2Q9ULH7 1088 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 ZNF711Q9Y462 761 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 DAGLAQ9Y4D2 1042 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 PCDHGC5Q9Y5F6 944 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 AATKQ6ZMQ8 1374 aa6.17□□□□□ -1.42
DDB1-219ENST00000541513 FAM208AQ9UK61 1670 aaKnown RBP6.17□□□□□ -1.42
DDB1-219ENST00000541513 SLIT2O94813 1529 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 ISM1B1AKI9 464 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 SOX1O00570 391 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 AXIN1O15169 862 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 ATXN7O15265 892 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 FANCGO15287 622 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 P4HA1P13674 534 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 OSMP13725 252 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 MTHFD2P13995 350 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 STMN1P16949 149 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 CTSSP25774 331 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 ATP6V1E1P36543 226 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 STAT5AP42229 794 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 TNNT3P45378 269 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 WDR4P57081 412 aaKnown RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 RNF4P78317 190 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 AMPD2Q01433 879 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 PTK2BQ14289 1009 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 ZNF174Q15697 407 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 ZBTB37Q5TC79 503 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 E4F1Q66K89 784 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 UNC5DQ6UXZ4 953 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 C12orf40Q86WS4 652 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 NBPF5PQ86XG9 351 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 COL23A1Q86Y22 540 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 HID1Q8IV36 788 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 LIX1LQ8IVB5 337 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 HERC6Q8IVU3 1022 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 RPAP2Q8IXW5 612 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 ZZZ3Q8IYH5 903 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 DZIP1LQ8IYY4 767 aaKnown RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 CCDC33Q8N5R6 958 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 TTLL11Q8NHH1 800 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 VWCEQ96DN2 955 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 JAKMIP1Q96N16 626 aaKnown RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 CORO1BQ9BR76 489 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 TMEM160Q9NX00 188 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 USP36Q9P275 1121 aaKnown RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 KIF17Q9P2E2 1029 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 ITGB1BP2Q9UKP3 347 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 GPR55Q9Y2T6 319 aaPredicted RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 ATP6V0A2Q9Y487 856 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 WASF2Q9Y6W5 498 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 RTL1A6NKG5 1358 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 KIF24Q5T7B8 1368 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 KIAA0232Q92628 1395 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 PEAK1Q9H792 1746 aa6.16□□□□□ -1.42
DDB1-219ENST00000541513 SMG6Q86US8 1419 aaKnown RBP6.16□□□□□ -1.42
DDB1-219ENST00000541513 FAM181BA6NEQ2 426 aa6.15□□□□□ -1.42
DDB1-219ENST00000541513 TTLL8A6PVC2 850 aa6.15□□□□□ -1.42
DDB1-219ENST00000541513 DVL2O14641 736 aa6.15□□□□□ -1.42
DDB1-219ENST00000541513 HNRNPDLO14979 420 aaKnown RBP6.15□□□□□ -1.42
DDB1-219ENST00000541513 PHGDHO43175 533 aaKnown RBP6.15□□□□□ -1.42
DDB1-219ENST00000541513 MSCO60682 206 aa6.15□□□□□ -1.42
DDB1-219ENST00000541513 FAM155BO75949 473 aa6.15□□□□□ -1.42
DDB1-219ENST00000541513 RTN3O95197 1032 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms