RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CASTOR2A6NHX0 329 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 STK25O00506 426 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 CFHP08603 1231 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 ZNF174Q15697 407 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 CDCA2Q69YH5 1023 aaPredicted RBP26.53■■□□□ 1.84
LEMD3-203ENST00000541171 POTEGQ6S5H5 508 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 BSNDQ8WZ55 320 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 RHOBTB2Q9BYZ6 727 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 FZD8Q9H461 694 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 SNTG2Q9NY99 539 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 FNIP2Q9P278 1114 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 USP34Q70CQ2 3546 aa26.53■■□□□ 1.84
LEMD3-203ENST00000541171 AOC1P19801 751 aa26.52■■□□□ 1.84
LEMD3-203ENST00000541171 TUSC3Q13454 348 aa26.52■■□□□ 1.84
LEMD3-203ENST00000541171 PRPF4BQ13523 1007 aaKnown RBP26.52■■□□□ 1.84
LEMD3-203ENST00000541171 RTP2Q5QGT7 225 aa26.52■■□□□ 1.84
LEMD3-203ENST00000541171 PADI6Q6TGC4 694 aa26.52■■□□□ 1.84
LEMD3-203ENST00000541171 CEP57Q86XR8 500 aa26.52■■□□□ 1.84
LEMD3-203ENST00000541171 POLR3CQ9BUI4 534 aaPredicted RBP26.52■■□□□ 1.84
LEMD3-203ENST00000541171 C2orf40Q9H1Z8 148 aa26.52■■□□□ 1.84
LEMD3-203ENST00000541171 PDZD7Q9H5P4 517 aa26.52■■□□□ 1.84
LEMD3-203ENST00000541171 SF3B1O75533 1304 aaKnown RBP eCLIP26.51■■□□□ 1.83
LEMD3-203ENST00000541171 ARHGEF35A5YM69 484 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 PROB1E7EW31 1015 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 N4BP3O15049 544 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 CREMQ03060 361 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 FAM187BQ17R55 369 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 LILRA6Q6PI73 481 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 GET4Q7L5D6 327 aaPredicted RBP26.51■■□□□ 1.83
LEMD3-203ENST00000541171 ASCL5Q7RTU5 278 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 NOSTRINQ8IVI9 506 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 ERMNQ8TAM6 284 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 PRKD2Q9BZL6 878 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 CXCL16Q9H2A7 254 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 POLD4Q9HCU8 107 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 ZDHHC7Q9NXF8 308 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 EPS15L1Q9UBC2 864 aa26.51■■□□□ 1.83
LEMD3-203ENST00000541171 ZMYM2Q9UBW7 1377 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 PRKCBP05771 671 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 OR52Z1P0C646 297 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 MAPK6Q16659 721 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 CCDC83Q8IWF9 413 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 GPR65Q8IYL9 337 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 SLC44A3Q8N4M1 653 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 ST13P5Q8NFI4 369 aaPredicted RBP26.5■■□□□ 1.83
LEMD3-203ENST00000541171 DEPTORQ8TB45 409 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 C8orf76Q96K31 380 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 PPP4R2Q9NY27 417 aa26.5■■□□□ 1.83
LEMD3-203ENST00000541171 PTGESO14684 152 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 RECQL4O94761 1208 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 KIF4AO95239 1232 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 THP07101 528 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 CYP11B2P19099 503 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 RFX1P22670 979 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 NBL1P41271 181 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 FAM171A1Q5VUB5 890 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 ERICH6BQ5W0A0 696 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 FRMD5Q7Z6J6 570 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 RTP3Q9BQQ7 232 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 ADPGKQ9BRR6 497 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 TTPALQ9BTX7 342 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 CA14Q9ULX7 337 aa26.49■■□□□ 1.83
LEMD3-203ENST00000541171 ZMYND10O75800 440 aa26.48■■□□□ 1.83
LEMD3-203ENST00000541171 C1RP00736 705 aa26.48■■□□□ 1.83
LEMD3-203ENST00000541171 RPA1P27694 616 aa26.48■■□□□ 1.83
LEMD3-203ENST00000541171 EEF1DP3Q658K8 133 aa26.48■■□□□ 1.83
LEMD3-203ENST00000541171 WNT16Q9UBV4 365 aa26.48■■□□□ 1.83
LEMD3-203ENST00000541171 GDAQ9Y2T3 454 aa26.48■■□□□ 1.83
LEMD3-203ENST00000541171 KRBA1A5PL33 1030 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 ACKR2O00590 384 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 EDN1P05305 212 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 NAMPTP43490 491 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 PSMD5Q16401 504 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 CCDC105Q8IYK2 499 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 CLSTN3Q9BQT9 956 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 KIFC3Q9BVG8 833 aa26.47■■□□□ 1.83
LEMD3-203ENST00000541171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.47■■□□□ 1.83
LEMD3-203ENST00000541171 PRR23AA6NEV1 266 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 SEC24BO95487 1268 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 LAMP2P13473 410 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 GNL2Q13823 731 aaKnown RBP26.46■■□□□ 1.83
LEMD3-203ENST00000541171 TTC38Q5R3I4 469 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 DTWD2Q8NBA8 298 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 LNX1Q8TBB1 728 aaPredicted RBP26.46■■□□□ 1.83
LEMD3-203ENST00000541171 NXPE3Q969Y0 559 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 CCDC113Q9H0I3 377 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 LIMCH1Q9UPQ0 1083 aa26.46■■□□□ 1.83
LEMD3-203ENST00000541171 PTPRZ1P23471 2315 aaPredicted RBP26.46■■□□□ 1.83
LEMD3-203ENST00000541171 PAPLNO95428 1278 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 SRFP11831 508 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 FSHRP23945 695 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 CCT6AP40227 531 aaKnown RBP26.45■■□□□ 1.82
LEMD3-203ENST00000541171 PPP2R5AQ15172 486 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 ANGPT1Q15389 498 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 LIN9Q5TKA1 542 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 GRASPQ7Z6J2 395 aaPredicted RBP26.45■■□□□ 1.82
LEMD3-203ENST00000541171 GPR152Q8TDT2 470 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 PIK3R5Q8WYR1 880 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 IFT74Q96LB3 600 aa26.45■■□□□ 1.82
LEMD3-203ENST00000541171 FOXP1Q9H334 677 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms