RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 MTERF2Q49AM1 385 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 EME1Q96AY2 570 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 ACAP3Q96P50 834 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 NEU2Q9Y3R4 380 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 NRKQ7Z2Y5 1582 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 ERBB3P21860 1342 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 UBTFL6P0CB48 400 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 ATICP31939 592 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 ERVK-24P63145 666 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 MAP3K10Q02779 954 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 RABL6Q3YEC7 729 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 SCARA5Q6ZMJ2 495 aa15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 SKA2Q8WVK7 121 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 NAF1Q96HR8 494 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 ASCC2Q9H1I8 757 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-207ENST00000541122 ZFYVE16Q7Z3T8 1539 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 RIMBP3CA6NJZ7 1639 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 RIMBP3BA6NNM3 1639 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 RIMBP3Q9UFD9 1639 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 ATP6V1G2O95670 118 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SYF2O95926 243 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 GUCY1A2P33402 732 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SIK1P57059 783 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 CDO1Q16878 200 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 FOXP4Q8IVH2 680 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SPICE1Q8N0Z3 855 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 MAGEB18Q96M61 343 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 TBC1D22BQ9NU19 505 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 TMEM51Q9NW97 253 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SLC5A4Q9NY91 659 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 EMSYQ7Z589 1322 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 PLEKHG2Q9H7P9 1386 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 ARHGEF37A1IGU5 675 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SCP2P22307 547 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SLC29A2Q14542 456 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 ITPRIPL1Q6GPH6 555 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 ZBTB10Q96DT7 871 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 MAGEB5Q9BZ81 275 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 GID8Q9NWU2 228 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 PRR36Q9H6K5 1346 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 USP17L5A8MUK1 530 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 EYA4O95677 639 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 ZCWPW2Q504Y3 356 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 TMEM179Q6ZVK1 233 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 IGDCC4Q8TDY8 1250 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 CCT7Q99832 543 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 DCP1AQ9NPI6 582 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SMARCAL1Q9NZC9 954 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 HEY1Q9Y5J3 304 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 SDC4P31431 198 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 MAGEA4P43358 317 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 PASD1Q8IV76 773 aa15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 RYBPQ8N488 228 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-207ENST00000541122 TCP10L2B9ZVM9 353 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 BBOX1O75936 387 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ZNF18P17022 549 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 CC2D2BQ6DHV5 1058 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 METTL23Q86XA0 190 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 C7orf31Q8N865 590 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 MAGED2Q9UNF1 606 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 TSC22D4Q9Y3Q8 395 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 POTEFA5A3E0 1075 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 F8W8V4 182 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 STRNO43815 780 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ADCY3O60266 1144 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 HSPA1AP0DMV8 641 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 HSPA1BP0DMV9 641 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 POTEGQ6S5H5 508 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 POTEEQ6S8J3 1075 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ZBTB33Q86T24 672 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ASPSCR1Q9BZE9 553 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 MANSC1Q9H8J5 431 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 CHCHD3Q9NX63 227 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 PPME1Q9Y570 386 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 FSBPO95073 299 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ZNF200P98182 395 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 C4orf33Q8N1A6 199 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 PAPOLBQ9NRJ5 636 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ASAP1Q9ULH1 1129 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 GJA3Q9Y6H8 435 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 CTDNEP1O95476 244 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 KLRC1P26715 233 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ABCE1P61221 599 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 LAMB3Q13751 1172 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 ZNF699Q32M78 642 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 PRUNE1Q86TP1 453 aa15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 CPSF3Q9UKF6 684 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-207ENST00000541122 AP3B1O00203 1094 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 KIAA0391O15091 583 aaKnown RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 CLDN3O15551 220 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 KRT16P08779 473 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 POLD1P28340 1107 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 ACBD5Q5T8D3 534 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 LVRNQ6Q4G3 990 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 DDX42Q86XP3 938 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 C9orf72Q96LT7 481 aa15.78■□□□□ 0.12
SMARCA4-207ENST00000541122 TIPINQ9BVW5 301 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms