RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ATAD5Q96QE3 1844 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 SLC26A4O43511 780 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 TRAPPC3O43617 180 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 PHF2O75151 1096 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 RTN2O75298 545 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 ASNSP08243 561 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 TNNI1P19237 187 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 PSMC4P43686 418 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
BNIP3-202ENST00000540159 DMP1Q13316 513 aaPredicted RBP14.65□□□□□ -0.06
BNIP3-202ENST00000540159 MTERF2Q49AM1 385 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 LRIG3Q6UXM1 1119 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 RNF207Q6ZRF8 634 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 THOC1Q96FV9 657 aaKnown RBP14.65□□□□□ -0.06
BNIP3-202ENST00000540159 ZBTB45Q96K62 511 aaPredicted RBP14.65□□□□□ -0.06
BNIP3-202ENST00000540159 STRA6Q9BX79 667 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 ANKFY1Q9P2R3 1169 aa14.65□□□□□ -0.06
BNIP3-202ENST00000540159 RRM1P23921 792 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 ZNF394Q53GI3 561 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 KAZNQ674X7 775 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 SLC39A4Q6P5W5 647 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 FAM160B2Q86V87 743 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PARD3BQ8TEW8 1205 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 OSBPL7Q9BZF2 842 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 RPAP3Q9H6T3 665 aaPredicted RBP14.64□□□□□ -0.07
BNIP3-202ENST00000540159 CD248Q9HCU0 757 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 ZNF862O60290 1169 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 CHKAP35790 457 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PTGER2P43116 358 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PTGIRP43119 386 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 ACTN3Q08043 901 aaPredicted RBP14.64□□□□□ -0.07
BNIP3-202ENST00000540159 ZKSCAN8Q15776 578 aaPredicted RBP14.64□□□□□ -0.07
BNIP3-202ENST00000540159 SGO2Q562F6 1265 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 CCDC13Q8IYE1 715 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 TMEM161BQ8NDZ6 487 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 GDAP1Q8TB36 358 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 NAP1L3Q99457 506 aaPredicted RBP14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PABPC3Q9H361 631 aaKnown RBP14.64□□□□□ -0.07
BNIP3-202ENST00000540159 RASAL2Q9UJF2 1139 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 SYNGAP1Q96PV0 1343 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PI4K2BG5E9Z4 385 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 DNM1LO00429 736 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PPFIA2O75334 1257 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PIAS1O75925 651 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 MAPK4P31152 587 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 PEX5P50542 639 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 HSD17B4P51659 736 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 SLC20A2Q08357 652 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 KRT39Q6A163 491 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 SLC13A5Q86YT5 568 aaPredicted RBP14.64□□□□□ -0.07
BNIP3-202ENST00000540159 HAUS1Q96CS2 278 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 NT5C1BQ96P26 610 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 C11orf70Q9BRQ4 267 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 RAB20Q9NX57 234 aa14.64□□□□□ -0.07
BNIP3-202ENST00000540159 R3HDM2Q9Y2K5 976 aaKnown RBP14.64□□□□□ -0.07
BNIP3-202ENST00000540159 MFAP3P55082 362 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 KRT17Q04695 432 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 CXCL9Q07325 125 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 FAM71AQ8IYT1 594 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 CEP89Q96ST8 783 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 ELAC2Q9BQ52 826 aaKnown RBP14.63□□□□□ -0.07
BNIP3-202ENST00000540159 HAUS2Q9NVX0 235 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 PFASO15067 1338 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 DPEP1P16444 411 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 CD58P19256 250 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 COILP38432 576 aaPredicted RBP14.63□□□□□ -0.07
BNIP3-202ENST00000540159 SMTNP53814 917 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 ATP13A4Q4VNC1 1196 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 TTLL6Q8N841 843 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 HELQQ8TDG4 1101 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 DYDC1Q8WWB3 177 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 PDCD2LQ9BRP1 358 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 KCNK9Q9NPC2 374 aa14.63□□□□□ -0.07
BNIP3-202ENST00000540159 GTF2BQ00403 316 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 KYNUQ16719 465 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 FAM133BQ5BKY9 247 aaKnown RBP14.62□□□□□ -0.07
BNIP3-202ENST00000540159 ICE2Q659A1 982 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 DLK2Q6UY11 383 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 NLRX1Q86UT6 975 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 SLC9A9Q8IVB4 645 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 TMEM130Q8N3G9 435 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 FBXL13Q8NEE6 735 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 SPIRE2Q8WWL2 714 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 GJA3Q9Y6H8 435 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
BNIP3-202ENST00000540159 SCP2P22307 547 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 PSMC5P62195 406 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 EEPD1Q7L9B9 569 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 LRRC34Q8IZ02 419 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 XPO6Q96QU8 1125 aaKnown RBP14.62□□□□□ -0.07
BNIP3-202ENST00000540159 RNF146Q9NTX7 359 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 KCND2Q9NZV8 630 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 UBIAD1Q9Y5Z9 338 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 COL4A5P29400 1685 aa14.62□□□□□ -0.07
BNIP3-202ENST00000540159 ANXA13P27216 316 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms