RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TMEM179Q6ZVK1 233 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 IRF2BP1Q8IU81 584 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 MIGA1Q8NAN2 632 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 ZSCAN18Q8TBC5 510 aaPredicted RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 LINC01599Q8WXQ3 324 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 INTS4Q96HW7 963 aaKnown RBP4.7□□□□□ -1.66
C2CD3-214ENST00000540057 CRBNQ96SW2 442 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 TEX13BQ9BXU2 312 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 PDGFCQ9NRA1 345 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 Q9Y3F1 56 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 INSL6Q9Y581 213 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 MICAL3Q7RTP6 2002 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 MYH8P13535 1937 aa4.7□□□□□ -1.66
C2CD3-214ENST00000540057 DMDP11532 3685 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 ABHD14A-ACY1A0A1B0GW23 586 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 SLC22A31A6NKX4 558 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 LINC01565O15544 149 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 NCK2O43639 380 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 GREM1O60565 184 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 NBNO60934 754 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 EYA4O95677 639 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 CXCL10P02778 98 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 UQCRFS1P1P0C7P4 283 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 TMEM253P0C7T8 217 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 AKR1B1P15121 316 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 GTF2F1P35269 517 aaKnown RBP eCLIP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 HTRA4P83105 476 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 ICA1Q05084 483 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 BFSP2Q13515 415 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 PUM1Q14671 1186 aaKnown RBP eCLIP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 ST3GAL2Q16842 350 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 ARSHQ5FYA8 562 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 FAM47CQ5HY64 1035 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 FAM83BQ5T0W9 1011 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 DIEXFQ68CQ4 756 aaKnown RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 MCTP2Q6DN12 878 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 IQSEC1Q6DN90 963 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 TAPT1Q6NXT6 567 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 PHACTR4Q8IZ21 702 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 ANKRD35Q8N283 1001 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 OXR1Q8N573 874 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 TMEM105Q8N8V8 129 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 FAM133AQ8N9E0 248 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 SYTL5Q8TDW5 730 aaPredicted RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 DHX38Q92620 1227 aaKnown RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 MSLNLQ96KJ4 702 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 RIPOR3Q96MK2 946 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 SAMD11Q96NU1 681 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 SLC6A17Q9H1V8 727 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 SH2D4AQ9H788 454 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 MRS2Q9HD23 443 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 PIH1D3Q9NQM4 214 aaKnown RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 DLL3Q9NYJ7 618 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 CD207Q9UJ71 328 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 RALYQ9UKM9 306 aaKnown RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 SMG5Q9UPR3 1016 aaKnown RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 DDX49Q9Y6V7 483 aaKnown RBP4.69□□□□□ -1.66
C2CD3-214ENST00000540057 DNAH14Q0VDD8 3507 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 RALGAPA2Q2PPJ7 1873 aa4.69□□□□□ -1.66
C2CD3-214ENST00000540057 EPG5Q9HCE0 2579 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 TPRP12270 2363 aaKnown RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 TCAF2A6NFQ2 919 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 ATP2A1O14983 1001 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 IGSF3O75054 1194 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 EFCAB14O75071 495 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 ATE1O95260 518 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 MYL3P08590 195 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 UBTFL1P0CB47 393 aaPredicted RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 EEF2P13639 858 aaKnown RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 PDIA4P13667 645 aaKnown RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 POLR2BP30876 1174 aaKnown RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 ICAM3P32942 547 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 GALK1P51570 392 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 LINC00310P59036 64 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 CHRNEQ04844 493 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 NMIQ13287 307 aaPredicted RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 ADAM15Q13444 863 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 PTPN21Q16825 1174 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 OVOS1Q6IE37 1185 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 NFRKBQ6P4R8 1299 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 LRRC8DQ7L1W4 858 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 EEPD1Q7L9B9 569 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 WDR63Q8IWG1 891 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 FBXO16Q8IX29 292 aaPredicted RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 TMEM192Q8IY95 271 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 KIAA2013Q8IYS2 634 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 CPXCR1Q8N123 301 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 ANKS4BQ8N8V4 417 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 CAGE1Q8TC20 777 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 AFAP1L1Q8TED9 768 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 CTAGE1Q96RT6 745 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 NUP88Q99567 741 aaPredicted RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 MTG1Q9BT17 334 aaPredicted RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 RAVER2Q9HCJ3 691 aaKnown RBP4.68□□□□□ -1.66
C2CD3-214ENST00000540057 BRMS1Q9HCU9 246 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 GMIPQ9P107 970 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 PCDHB14Q9Y5E9 798 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 GVINP1Q7Z2Y8 2422 aa4.68□□□□□ -1.66
C2CD3-214ENST00000540057 PTPRCP08575 1304 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms