RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 LPIN1Q14693 890 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 PLEKHG4Q58EX7 1191 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 HERC4Q5GLZ8 1057 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-212ENST00000539975 TWF2Q6IBS0 349 aaKnown RBP7.12□□□□□ -1.27
SNHG1-212ENST00000539975 C1orf186Q6ZWK4 172 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 USP49Q70CQ1 688 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 KSR1Q8IVT5 923 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 FAM178BQ8IXR5 827 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 ABI1Q8IZP0 508 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 PHOSPHO2Q8TCD6 241 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 RHBDD1Q8TEB9 315 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 WNT8BQ93098 351 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 BICD1Q96G01 975 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 ZNF668Q96K58 619 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-212ENST00000539975 PRIMPOLQ96LW4 560 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 CTAGE1Q96RT6 745 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 SLC9A7Q96T83 725 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 GDF15Q99988 308 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 ADPGKQ9BRR6 497 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 TCHPQ9BT92 498 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 NFKBIZQ9BYH8 718 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 MRPL44Q9H9J2 332 aaKnown RBP7.12□□□□□ -1.27
SNHG1-212ENST00000539975 TIMMDC1Q9NPL8 285 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 GPRC5CQ9NQ84 441 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 C1orf112Q9NSG2 853 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 SEL1LQ9UBV2 794 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 ST3GAL5Q9UNP4 418 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 EXOC7Q9UPT5 735 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 PIN4Q9Y237 131 aaKnown RBP7.12□□□□□ -1.27
SNHG1-212ENST00000539975 PCDHB7Q9Y5E2 793 aa7.12□□□□□ -1.27
SNHG1-212ENST00000539975 A0A1B0GTH6 734 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 SFI1A8K8P3 1242 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 CDK2AP1O14519 115 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 NBNO60934 754 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 ZNF202O95125 648 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 SMC2O95347 1197 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 ATP2A2P16615 1042 aaKnown RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 GLRA2P23416 452 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 MATR3P43243 847 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 NPTX2P47972 431 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 RAB27AP51159 221 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 NDUFA8P51970 172 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 PTENP60484 403 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 MGAT3Q09327 533 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 DRP2Q13474 957 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 PRPF4BQ13523 1007 aaKnown RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 ALCAMQ13740 583 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 CAPSQ13938 189 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 HSP90AA2PQ14568 343 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 TMEM240Q5SV17 173 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 NOTUMQ6P988 496 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 SLC24A5Q71RS6 500 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 SV2AQ7L0J3 742 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 KCNK18Q7Z418 384 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 MYOCDQ8IZQ8 938 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 SYCP3Q8IZU3 236 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 LINC01465Q8N7H1 131 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 ASAP3Q8TDY4 903 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 HERVK_113Q902F9 699 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 PGBD4Q96DM1 585 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 CCDC51Q96ER9 411 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 CEP89Q96ST8 783 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 ADAM2Q99965 735 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.11□□□□□ -1.271e-17■■■□□ 16.6
SNHG1-212ENST00000539975 REEP2Q9BRK0 252 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 NTPCRQ9BSD7 190 aaKnown RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 RUSC1Q9BVN2 902 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 GTPBP4Q9BZE4 634 aaKnown RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 ADAMTS10Q9H324 1103 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 XPNPEP1Q9NQW7 623 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 BLOC1S4Q9NUP1 217 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 PANK4Q9NVE7 773 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 DNAAF2Q9NVR5 837 aaKnown RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 RMND1Q9NWS8 449 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 SERTAD1Q9UHV2 236 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 MSRAQ9UJ68 235 aa7.11□□□□□ -1.27
SNHG1-212ENST00000539975 NOC2LQ9Y3T9 749 aaKnown RBP7.11□□□□□ -1.27
SNHG1-212ENST00000539975 NPHP3-ACAD11A0A0J9YXS1 232 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 PVALEFA0A1B0GWK0 134 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 A6NJY4 79 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 K7ENM7 598 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 N4BP3O15049 544 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 SLC16A4O15374 487 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 CSDE1O75534 798 aaKnown RBP7.1□□□□□ -1.27
SNHG1-212ENST00000539975 GCNT3O95395 438 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 F11P03951 625 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 PRKCBP05771 671 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 MAPTP10636 758 aaKnown RBP7.1□□□□□ -1.27
SNHG1-212ENST00000539975 GMPRP36959 345 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 LIG4P49917 911 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 INSM1Q01101 510 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-212ENST00000539975 PSMD2Q13200 908 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 GIT2Q14161 759 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 SHHQ15465 462 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 RAB30Q15771 203 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 LONRF3Q496Y0 759 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
SNHG1-212ENST00000539975 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms