RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 NKX3-2P78367 333 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 MCL1Q07820 350 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 PRPF4BQ13523 1007 aaKnown RBP18.28■□□□□ 0.52
COPS3-212ENST00000539941 PKN2Q16513 984 aaKnown RBP18.28■□□□□ 0.52
COPS3-212ENST00000539941 ASIC2Q16515 512 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 HGSNATQ68CP4 663 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 IQCEQ6IPM2 695 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 ZNF662Q6ZS27 426 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 KIF18AQ8NI77 898 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 LMBR1Q8WVP7 490 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 CCDC127Q96BQ5 260 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 ZBTB45Q96K62 511 aaPredicted RBP18.28■□□□□ 0.52
COPS3-212ENST00000539941 STK33Q9BYT3 514 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 LCA5LO95447 670 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 GJB1P08034 283 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 MYL3P08590 195 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 ANXA13P27216 316 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 RGS19P49795 217 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 NFRKBQ6P4R8 1299 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 CRELD2Q6UXH1 353 aaPredicted RBP18.28■□□□□ 0.52
COPS3-212ENST00000539941 KIAA0319LQ8IZA0 1049 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 ACRBPQ8NEB7 543 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 ZBTB10Q96DT7 871 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 FNBP1Q96RU3 617 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 UPF3AQ9H1J1 476 aaKnown RBP18.28■□□□□ 0.52
COPS3-212ENST00000539941 DEF6Q9H4E7 631 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 PTPRHQ9HD43 1115 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 SETD4Q9NVD3 440 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 TNFSF13BQ9Y275 285 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 SMIM35A0A1B0GVV1 85 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 ABLIM1O14639 778 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 OGTO15294 1046 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 SEPT4O43236 478 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 EIF4A3P38919 411 aaKnown RBP18.27■□□□□ 0.52
COPS3-212ENST00000539941 PRKCIP41743 596 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 GPC3P51654 580 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 ETF1P62495 437 aaKnown RBP18.27■□□□□ 0.52
COPS3-212ENST00000539941 CAP1Q01518 475 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 SPA17Q15506 151 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 ATF7IP2Q5U623 682 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 MPZL3Q6UWV2 235 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 SRGAP1Q7Z6B7 1085 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 BRSK2Q8IWQ3 736 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 TCHPQ9BT92 498 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 SPC25Q9HBM1 224 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 FAM53CQ9NYF3 392 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 RBAKQ9NYW8 714 aaPredicted RBP18.27■□□□□ 0.52
COPS3-212ENST00000539941 DNAJC12Q9UKB3 198 aa18.27■□□□□ 0.52
COPS3-212ENST00000539941 A0A087WZ62 844 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 GNRH1P01148 92 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 CCDC172P0C7W6 258 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 DLATP10515 647 aaKnown RBP18.26■□□□□ 0.51
COPS3-212ENST00000539941 FERP16591 822 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 STAT1P42224 750 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 ACOT2P49753 483 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 KIF11P52732 1056 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 ADAM17P78536 824 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 PURAQ00577 322 aaKnown RBP18.26■□□□□ 0.51
COPS3-212ENST00000539941 SURF1Q15526 300 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 ASTE1Q2TB18 679 aaPredicted RBP18.26■□□□□ 0.51
COPS3-212ENST00000539941 ARHGAP29Q52LW3 1261 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 TDRD12Q587J7 1177 aaKnown RBP18.26■□□□□ 0.51
COPS3-212ENST00000539941 TXLNBQ8N3L3 684 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 FBXL13Q8NEE6 735 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 FDXACB1Q9BRP7 624 aaPredicted RBP18.26■□□□□ 0.51
COPS3-212ENST00000539941 MINDY3Q9H8M7 445 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 REXO2Q9Y3B8 237 aaKnown RBP18.26■□□□□ 0.51
COPS3-212ENST00000539941 CNTNAP2Q9UHC6 1331 aa18.26■□□□□ 0.51
COPS3-212ENST00000539941 TTLL13PA6NNM8 815 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 AKR1B10O60218 316 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 FAM189A1O60320 539 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 ZC3H11AO75152 810 aaKnown RBP eCLIP18.25■□□□□ 0.51
COPS3-212ENST00000539941 VTNP04004 478 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 PLEKP08567 350 aaPredicted RBP18.25■□□□□ 0.51
COPS3-212ENST00000539941 GNAT1P11488 350 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 AP3M2P53677 418 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 BEX3Q00994 111 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 KLHL30Q0D2K2 578 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 C15orf39Q6ZRI6 1047 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 SV2AQ7L0J3 742 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 HAUS4Q9H6D7 363 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 SRRDQ9UH36 339 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 F8VZ95 297 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 RBAK-RBAKDNI3L0D1 243 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 RARBP10826 455 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 HOXC8P31273 242 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 SOX5P35711 763 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 POU5F1Q01860 360 aaKnown RBP18.25■□□□□ 0.51
COPS3-212ENST00000539941 PCBP1Q15365 356 aaKnown RBP eCLIP18.25■□□□□ 0.51
COPS3-212ENST00000539941 AMHR2Q16671 573 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 KYAT1Q16773 422 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 IRF2BP2Q7Z5L9 587 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 NLRP7Q8WX94 980 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 FAM81BQ96LP2 452 aa18.25■□□□□ 0.51
COPS3-212ENST00000539941 MTG1Q9BT17 334 aaPredicted RBP18.25■□□□□ 0.51
COPS3-212ENST00000539941 AJAP1Q9UKB5 411 aaPredicted RBP18.25■□□□□ 0.51
COPS3-212ENST00000539941 C6orf222P0C671 652 aaPredicted RBP18.24■□□□□ 0.51
COPS3-212ENST00000539941 CACNB2Q08289 660 aaPredicted RBP18.24■□□□□ 0.51
COPS3-212ENST00000539941 DRAP1Q14919 205 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms