RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 TBCAO75347 108 aaKnown RBP11.75□□□□□ -0.53
HMGA2-209ENST00000539662 MYBP10242 640 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 ZNF568Q3ZCX4 644 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 TIGD5Q53EQ6 642 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 FAM178BQ8IXR5 827 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 B3GALT6Q96L58 329 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 ZMAT2Q96NC0 199 aaKnown RBP11.75□□□□□ -0.53
HMGA2-209ENST00000539662 STRA6Q9BX79 667 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 BLZF1Q9H2G9 400 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 KBTBD4Q9NVX7 518 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 LARSQ9P2J5 1176 aaKnown RBP11.75□□□□□ -0.53
HMGA2-209ENST00000539662 ANKFY1Q9P2R3 1169 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 THEGQ9P2T0 379 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 C5orf42Q9H799 3197 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 CASTOR2A6NHX0 329 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 H3BQ06 376 aaPredicted RBP11.74□□□□□ -0.53
HMGA2-209ENST00000539662 PPP1R37O75864 691 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 GLP2RO95838 553 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 EFEMP2O95967 443 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 IDEP14735 1019 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 PFKFB1P16118 471 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 TNFSF9P41273 254 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 OR1G1P47890 313 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 NRIP1P48552 1158 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 ALDH7A1P49419 539 aaKnown RBP11.74□□□□□ -0.53
HMGA2-209ENST00000539662 SMTNP53814 917 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 KRT85P78386 507 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 GTF2BQ00403 316 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 SOX4Q06945 474 aaPredicted RBP11.74□□□□□ -0.53
HMGA2-209ENST00000539662 STRN3Q13033 797 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 MPZL3Q6UWV2 235 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 VPS52Q8N1B4 723 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 ZSWIM2Q8NEG5 633 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 FAM193BQ96PV7 902 aaPredicted RBP11.74□□□□□ -0.53
HMGA2-209ENST00000539662 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 ADPGKQ9BRR6 497 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 TCHPQ9BT92 498 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 GOLPH3LQ9H4A5 285 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 UBE2ZQ9H832 354 aaPredicted RBP11.74□□□□□ -0.53
HMGA2-209ENST00000539662 GOLGA2P5Q9HBQ8 144 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 UBN1Q9NPG3 1134 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 SERTAD1Q9UHV2 236 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 FAN1Q9Y2M0 1017 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 PDCD11Q14690 1871 aaKnown RBP11.74□□□□□ -0.53
HMGA2-209ENST00000539662 CITO14578 2027 aa11.74□□□□□ -0.53
HMGA2-209ENST00000539662 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
HMGA2-209ENST00000539662 FAM189A1O60320 539 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 TBX10O75333 385 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 TOM1L1O75674 476 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 ALDH2P05091 517 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 MCF2P10911 925 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 ANK1P16157 1881 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 KCNA5P22460 613 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 GRM5P41594 1212 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 AFMP43652 599 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 UBE3AQ05086 875 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 SPAG1Q07617 926 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 CUL4BQ13620 913 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 CLUL1Q15846 466 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 CTC1Q2NKJ3 1217 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 SLC10A6Q3KNW5 377 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 DCAF4L1Q3SXM0 396 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 CD300LGQ6UXG3 332 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 ALKAL1Q6UXT8 129 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 EP400NLQ6ZTU2 488 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 HASPINQ8TF76 798 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 KCNN1Q92952 543 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 HLA-CQ95604 372 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 TMEM169Q96HH4 297 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 NECAB3Q96P71 396 aaPredicted RBP11.73□□□□□ -0.53
HMGA2-209ENST00000539662 PPP1R10Q96QC0 940 aaKnown RBP11.73□□□□□ -0.53
HMGA2-209ENST00000539662 TMEM175Q9BSA9 504 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 TRIM9Q9C026 710 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 ZBP1Q9H171 429 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 ENTPD7Q9NQZ7 604 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 PANK4Q9NVE7 773 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 CLDND1Q9NY35 253 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 KANSL3Q9P2N6 904 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 KCNH3Q9ULD8 1083 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 HPSEQ9Y251 543 aa11.73□□□□□ -0.53
HMGA2-209ENST00000539662 SMIM28A0A1B0GU29 152 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 C2orf71A6NGG8 1288 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 PRPF6O94906 941 aaKnown RBP11.72□□□□□ -0.53
HMGA2-209ENST00000539662 CXCL14O95715 111 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 PIGRP01833 764 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 BMP1P13497 986 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 ADSSP30520 456 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 HOXD13P35453 343 aa11.72□□□□□ -0.53
HMGA2-209ENST00000539662 PPM1AP35813 382 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms