RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 OSTNP61366 133 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 SLC10A6Q3KNW5 377 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 DCAF4L1Q3SXM0 396 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 SCARA3Q6AZY7 606 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 THNSL1Q8IYQ7 743 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 GUF1Q8N442 669 aaKnown RBP14.2□□□□□ -0.14
CCDC42-202ENST00000539522 RNF169Q8NCN4 708 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 BICD1Q96G01 975 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 ZMAT2Q96NC0 199 aaKnown RBP14.2□□□□□ -0.14
CCDC42-202ENST00000539522 APOL6Q9BWW8 343 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 TSPY26PQ9H489 355 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 PCIF1Q9H4Z3 704 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 CWH43Q9H720 699 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 DMAC2Q9NW81 257 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 CPSF3Q9UKF6 684 aaKnown RBP14.2□□□□□ -0.14
CCDC42-202ENST00000539522 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.19□□□□□ -0.14
CCDC42-202ENST00000539522 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.19□□□□□ -0.14
CCDC42-202ENST00000539522 TRIM49BA6NDI0 452 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 GOLGA6L3A6NEY3 463 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 ARL5CA6NH57 179 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 CLIC2O15247 247 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 CLDN3O15551 220 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 STAG3L1P0CL83 205 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 MLH1P40692 756 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 ACOT2P49753 483 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 ENOX2Q16206 610 aaKnown RBP14.19□□□□□ -0.14
CCDC42-202ENST00000539522 CENPPQ6IPU0 288 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 ZNF280BQ86YH2 543 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 PLEKHO2Q8TD55 490 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 TMEM174Q8WUU8 243 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 SAAL1Q96ER3 474 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 FAM84AQ96KN4 292 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 FBXL18Q96ME1 805 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 GAD1Q99259 594 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 RAD9AQ99638 391 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 GBP3Q9H0R5 595 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 TMEM206Q9H813 350 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 RMND1Q9NWS8 449 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 CACNG4Q9UBN1 327 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 TRAF3IP3Q9Y228 551 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 PCDHB7Q9Y5E2 793 aa14.19□□□□□ -0.14
CCDC42-202ENST00000539522 MRPL42Q9Y6G3 142 aaKnown RBP14.19□□□□□ -0.14
CCDC42-202ENST00000539522 LINC01553A4QN01 128 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 GOLGA8IPA6NC78 632 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 GOLGA8JA6NMD2 632 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 OGTO15294 1046 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 DDHD2O94830 711 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 CA3P07451 260 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 CXCL8P10145 99 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 ITGA4P13612 1032 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 GARTP22102 1010 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 ABCD1P33897 745 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 SMAD3P84022 425 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 NCBP1Q09161 790 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 DPCR1Q3MIW9 517 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 PAN2Q504Q3 1202 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 GAS2L3Q86XJ1 694 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 C12orf56Q8IXR9 622 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 ZC3H3Q8IXZ2 948 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 SNX27Q96L92 541 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 DUSP9Q99956 384 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 FUCA2Q9BTY2 467 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 MSTO1Q9BUK6 570 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 MTIF3Q9H2K0 278 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 NKX2-4Q9H2Z4 354 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 RSAD1Q9HA92 442 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 TYW1Q9NV66 732 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 TBC1D13Q9NVG8 400 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 AGO2Q9UKV8 859 aaKnown RBP14.18□□□□□ -0.14
CCDC42-202ENST00000539522 PCDHA11Q9Y5I1 949 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 EYSQ5T1H1 3165 aa14.18□□□□□ -0.14
CCDC42-202ENST00000539522 PTPRJQ12913 1337 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TTC26A0AVF1 554 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 FSD2A1L4K1 749 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 EPOPA6NHQ4 379 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TBKBP1A7MCY6 615 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 PDXKO00764 312 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TLL1O43897 1013 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 CAVIN2O95810 425 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 SKIP12755 728 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 CASP4P49662 377 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 SCNN1GP51170 649 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TAP1Q03518 808 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 SOX4Q06945 474 aaPredicted RBP14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TMEM132AQ24JP5 1023 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 HABP4Q5JVS0 413 aaKnown RBP14.17□□□□□ -0.14
CCDC42-202ENST00000539522 ANKRD40Q6AI12 368 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 CBWD2Q8IUF1 395 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 CMTR2Q8IYT2 770 aaKnown RBP14.17□□□□□ -0.14
CCDC42-202ENST00000539522 SYCP3Q8IZU3 236 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TRIML1Q8N9V2 468 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 POMGNT1Q8WZA1 660 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 PPP1R10Q96QC0 940 aaKnown RBP14.17□□□□□ -0.14
CCDC42-202ENST00000539522 ADPGKQ9BRR6 497 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TCHPQ9BT92 498 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TRIM6Q9C030 488 aaPredicted RBP14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TMEM117Q9H0C3 514 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 TTYH1Q9H313 450 aaPredicted RBP14.17□□□□□ -0.14
CCDC42-202ENST00000539522 HSPBP1Q9NZL4 362 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms