RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CSDE1O75534 798 aaKnown RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 FGBP02675 491 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 AMHP03971 560 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 ITGA4P13612 1032 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 PROZP22891 400 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 HOXA11P31270 313 aaPredicted RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 GRM5P41594 1212 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 CYP2J2P51589 502 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 KCNA1Q09470 495 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 SNRNP35Q16560 246 aaKnown RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 FILIP1LQ4L180 1135 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 TRAF7Q6Q0C0 670 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 TAS1R3Q7RTX0 852 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 FRMD5Q7Z6J6 570 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 NT5DC4Q86YG4 428 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 ABI1Q8IZP0 508 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 GLIS3Q8NEA6 775 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 CACTINQ8WUQ7 758 aaKnown RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 CPB2Q96IY4 423 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 FNBP1Q96RU3 617 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 ADAM2Q99965 735 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 SRRTQ9BXP5 876 aaKnown RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 FGFBP2Q9BYJ0 223 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 WNT8AQ9H1J5 351 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 ASB7Q9H672 318 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 ELAC1Q9H777 363 aaKnown RBP11.13□□□□□ -0.63
CLPB-210ENST00000539148 FAM105AQ9NUU6 356 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 LTBP2Q14767 1821 aa11.13□□□□□ -0.63
CLPB-210ENST00000539148 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 TRIM43BA6NCK2 446 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 CLIC2O15247 247 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 NBNO60934 754 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 NPTXRO95502 500 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 TUBB4AP04350 444 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 HARSP12081 509 aaKnown RBP11.12□□□□□ -0.63
CLPB-210ENST00000539148 FGFR4P22455 802 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 STX17P56962 302 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 C11orf57Q6ZUT1 292 aaPredicted RBP11.12□□□□□ -0.63
CLPB-210ENST00000539148 ZBTB33Q86T24 672 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 FAM186BQ8IYM0 893 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 THNSL1Q8IYQ7 743 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 AOPEPQ8N6M6 819 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 URGCPQ8TCY9 931 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
CLPB-210ENST00000539148 SCLYQ96I15 445 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 RPS6KC1Q96S38 1066 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 FAM213AQ9BRX8 229 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 CDT1Q9H211 546 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 AGO3Q9H9G7 860 aaKnown RBP11.12□□□□□ -0.63
CLPB-210ENST00000539148 PTPRHQ9HD43 1115 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 SLC38A7Q9NVC3 462 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 DMAC2Q9NW81 257 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 RBAKQ9NYW8 714 aaPredicted RBP11.12□□□□□ -0.63
CLPB-210ENST00000539148 GIT1Q9Y2X7 761 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 DERAQ9Y315 318 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 PCDHB2Q9Y5E7 798 aa11.12□□□□□ -0.63
CLPB-210ENST00000539148 TTC3P53804 2025 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 PDCD11Q14690 1871 aaKnown RBP11.11□□□□□ -0.63
CLPB-210ENST00000539148 ANKRD63C9JTQ0 380 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 N4BP1O75113 896 aaKnown RBP11.11□□□□□ -0.63
CLPB-210ENST00000539148 CSF2RAP15509 400 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 HOXD13P35453 343 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
CLPB-210ENST00000539148 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
CLPB-210ENST00000539148 GLB1LQ6UWU2 654 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 NPAS4Q8IUM7 802 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 DHX40Q8IX18 779 aaKnown RBP11.11□□□□□ -0.63
CLPB-210ENST00000539148 ZC3H3Q8IXZ2 948 aaKnown RBP11.11□□□□□ -0.63
CLPB-210ENST00000539148 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 BADQ92934 168 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 FBXL18Q96ME1 805 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 CBWD1Q9BRT8 395 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 MRPL9Q9BYD2 267 aaKnown RBP11.11□□□□□ -0.63
CLPB-210ENST00000539148 PCIF1Q9H4Z3 704 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
CLPB-210ENST00000539148 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLPB-210ENST00000539148 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 ANK1P16157 1881 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 TRIM49BA6NDI0 452 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 CCP110O43303 1012 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 OFD1O75665 1012 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 TNNC2P02585 160 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 PAX3P23760 479 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 ADSSP30520 456 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 GTF2H1P32780 548 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 VAMP7P51809 220 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 DSC3Q14574 896 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
CLPB-210ENST00000539148 FKBP15Q5T1M5 1219 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms