RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ITGA4P13612 1032 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 DNAJB1P25685 340 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 GRM5P41594 1212 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 ERVK-21P61565 698 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 AMPD3Q01432 767 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 SOX4Q06945 474 aaPredicted RBP14.33□□□□□ -0.12
CHFR-216ENST00000538235 STRN3Q13033 797 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 BTG3Q14201 252 aaPredicted RBP14.33□□□□□ -0.12
CHFR-216ENST00000538235 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 HVCN1Q96D96 273 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 SNX27Q96L92 541 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 PAAF1Q9BRP4 392 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 VN1R3Q9BXE9 311 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 PRDM12Q9H4Q4 367 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 NRDE2Q9H7Z3 1164 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
CHFR-216ENST00000538235 EIF3DO15371 548 aaKnown RBP eCLIP14.32□□□□□ -0.12
CHFR-216ENST00000538235 CXCL8P10145 99 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 MCF2P10911 925 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 CD44P16070 742 aaKnown RBP14.32□□□□□ -0.12
CHFR-216ENST00000538235 LIG4P49917 911 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 SPAG1Q07617 926 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 DSC1Q08554 894 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 CAMK1Q14012 370 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 SLC10A6Q3KNW5 377 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 DCAF4L1Q3SXM0 396 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 EPC2Q52LR7 807 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 NOMO2Q5JPE7 1267 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 ALKAL1Q6UXT8 129 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 ARNTL2Q8WYA1 636 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 RABGGTAQ92696 567 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 SAAL1Q96ER3 474 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 BICD1Q96G01 975 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 LRRC27Q9C0I9 530 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
CHFR-216ENST00000538235 KCTD10Q9H3F6 313 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 EXOC1Q9NV70 894 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 MARCH5Q9NX47 278 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 MTMR10Q9NXD2 777 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 MAN1B1Q9UKM7 699 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 MAPK8IP1Q9UQF2 711 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 PCDHGC5Q9Y5F6 944 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 COL6A3P12111 3177 aa14.32□□□□□ -0.12
CHFR-216ENST00000538235 GOLGA8IPA6NC78 632 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 GOLGA8JA6NMD2 632 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 NT5C1B-RDH14C9J2C7 533 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 ADRB2P07550 413 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 SLC11A1P49279 550 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 KCNB1Q14721 858 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 ENOX2Q16206 610 aaKnown RBP14.31□□□□□ -0.12
CHFR-216ENST00000538235 CAMK4Q16566 473 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 CSPP1Q1MSJ5 1256 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 XKR4Q5GH76 650 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 ISM2Q6H9L7 571 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 LRRC43Q8N309 656 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 FIBCD1Q8N539 461 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 COLGALT1Q8NBJ5 622 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 MYLIPQ8WY64 445 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 PPP1R10Q96QC0 940 aaKnown RBP14.31□□□□□ -0.12
CHFR-216ENST00000538235 ACCSQ96QU6 501 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 TRIM6Q9C030 488 aaPredicted RBP14.31□□□□□ -0.12
CHFR-216ENST00000538235 SLC28A3Q9HAS3 691 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 GOLGA2P5Q9HBQ8 144 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 PARP2Q9UGN5 583 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 CPSF3Q9UKF6 684 aaKnown RBP14.31□□□□□ -0.12
CHFR-216ENST00000538235 PTPRJQ12913 1337 aa14.31□□□□□ -0.12
CHFR-216ENST00000538235 PRUNE2Q8WUY3 3088 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 H0YCG3 227 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 GRM6O15303 877 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 KINO60870 393 aaKnown RBP14.3□□□□□ -0.12
CHFR-216ENST00000538235 ITGB1P05556 798 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 MYL1P05976 194 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 CTNNB1P35222 781 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 ACOT2P49753 483 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 GUCY2FP51841 1108 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 PMS1P54277 932 aaKnown RBP14.3□□□□□ -0.12
CHFR-216ENST00000538235 ZCWPW2Q504Y3 356 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 ZNF697Q5TEC3 545 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 GLB1LQ6UWU2 654 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 CD300LGQ6UXG3 332 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 FAM43BQ6ZT52 329 aaPredicted RBP14.3□□□□□ -0.12
CHFR-216ENST00000538235 COLGALT2Q8IYK4 626 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 DEFB123Q8N688 67 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 PLEKHO2Q8TD55 490 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 C18orf25Q96B23 403 aaPredicted RBP14.3□□□□□ -0.12
CHFR-216ENST00000538235 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
CHFR-216ENST00000538235 GBP3Q9H0R5 595 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 CLSTN2Q9H4D0 955 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 PCIF1Q9H4Z3 704 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 AGPAT3Q9NRZ7 376 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 GIT1Q9Y2X7 761 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 UBE4BO95155 1302 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 BRWD1Q9NSI6 2320 aa14.3□□□□□ -0.12
CHFR-216ENST00000538235 SPTBN5Q9NRC6 3674 aaKnown RBP14.29□□□□□ -0.12
CHFR-216ENST00000538235 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 TTC26A0AVF1 554 aa14.29□□□□□ -0.12
CHFR-216ENST00000538235 C5orf67F2Z3F1 127 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms