RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PCYT2Q99447 389 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 CARD9Q9H257 536 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 PSD3Q9NYI0 1048 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 POLR2AP24928 1970 aaKnown RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 MIF4GDA9UHW6 222 aaKnown RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 RNF40O75150 1001 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 MTA2O94776 668 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 GGPS1O95749 300 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 SYF2O95926 243 aaKnown RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 LDHAP00338 332 aaKnown RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 MMEP08473 750 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 CARSP49589 748 aaKnown RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 STAT5BP51692 787 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 GYS2P54840 703 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 FMO1Q01740 532 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 TARBP2Q15633 366 aaKnown RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 C15orf39Q6ZRI6 1047 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.85■□□□□ 0.29
MKS1-204ENST00000537529 EIF1ADQ8N9N8 165 aaKnown RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 CASKIN2Q8WXE0 1202 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 IFT81Q8WYA0 676 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 SEPT1Q8WYJ6 367 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.85■□□□□ 0.29
MKS1-204ENST00000537529 CLMNQ96JQ2 1002 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 NAP1L3Q99457 506 aaPredicted RBP16.85■□□□□ 0.29
MKS1-204ENST00000537529 AP1M1Q9BXS5 423 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 SLITRK6Q9H5Y7 841 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 TMEM134Q9H6X4 195 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 SPON1Q9HCB6 807 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 NFU1Q9UMS0 254 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 KCNH4Q9UQ05 1017 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 GGCXP38435 758 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 PPIL2Q13356 520 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 WDR44Q5JSH3 913 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 ALS2CLQ60I27 953 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 KCNV1Q6PIU1 500 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 MORC4Q8TE76 937 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 WHAMMQ8TF30 809 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 TATDN2Q93075 761 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 ZBTB9Q96C00 473 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 CDCA5Q96FF9 252 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 ZMYND15Q9H091 742 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 LRRC37A2A6NM11 1700 aa16.85■□□□□ 0.29
MKS1-204ENST00000537529 SIP14410 1827 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 ESYT3A0FGR9 886 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 ZSCAN5CA6NGD5 496 aaPredicted RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 PHACTR2O75167 634 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 KRT5P13647 590 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 TNNI1P19237 187 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 TCF7P36402 384 aaPredicted RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 PIK3CAP42336 1068 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 NLRP11P59045 1033 aaKnown RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 UBL4BQ8N7F7 174 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 MSTO1Q9BUK6 570 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 MYH9P35579 1960 aaKnown RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 FAM170AA1A519 330 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 HSF2BPO75031 334 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 CYP1A2P05177 515 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 CUL1Q13616 776 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 ZACNQ401N2 412 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 CCDC26Q8TAB7 109 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 ZNF516Q92618 1163 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 RPS6KC1Q96S38 1066 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 PLEKHA4Q9H4M7 779 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 TAF1DQ9H5J8 278 aaPredicted RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 RBAKQ9NYW8 714 aaPredicted RBP16.84■□□□□ 0.29
MKS1-204ENST00000537529 ALG6Q9Y672 507 aa16.84■□□□□ 0.29
MKS1-204ENST00000537529 AGPSO00116 658 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 SART1O43290 800 aaKnown RBP16.83■□□□□ 0.28
MKS1-204ENST00000537529 MAFO75444 373 aaPredicted RBP16.83■□□□□ 0.28
MKS1-204ENST00000537529 HLA-DRAP01903 254 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 FGGP02679 453 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 OSBPP22059 807 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 ACOT2P49753 483 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 CAPSQ13938 189 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 PPP2R5EQ16537 467 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 DCAF12L1Q5VU92 463 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 DHX38Q92620 1227 aaKnown RBP16.83■□□□□ 0.28
MKS1-204ENST00000537529 ZNF653Q96CK0 615 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 RUFY1Q96T51 708 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 PI4K2AQ9BTU6 479 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 TARS2Q9BW92 718 aaKnown RBP16.83■□□□□ 0.28
MKS1-204ENST00000537529 FHDC1Q9C0D6 1143 aaPredicted RBP16.83■□□□□ 0.28
MKS1-204ENST00000537529 ACP6Q9NPH0 428 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 ANKFY1Q9P2R3 1169 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 GTF3C4Q9UKN8 822 aa16.83■□□□□ 0.28
MKS1-204ENST00000537529 A0A0B4J269 797 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 GOLGA6L10A0A0M3HER8 536 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 TMEM110-MUSTN1A8MSY1 372 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 ADCY3O60266 1144 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 OPA1O60313 960 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 BIRC3Q13489 604 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 LY6KQ17RY6 165 aa16.82■□□□□ 0.28
MKS1-204ENST00000537529 FASTKD5Q7L8L6 764 aaKnown RBP16.82■□□□□ 0.28
MKS1-204ENST00000537529 EEPD1Q7L9B9 569 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms