RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 FAM187BQ17R55 369 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 DCAF4L1Q3SXM0 396 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 ATF7IP2Q5U623 682 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 LARP1BQ659C4 914 aaKnown RBP9.23□□□□□ -0.93
DDB1-208ENST00000537120 OTOP3Q7RTS5 596 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 KREMEN2Q8NCW0 462 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 RASSF8Q8NHQ8 419 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 RIN2Q8WYP3 895 aaPredicted RBP9.23□□□□□ -0.93
DDB1-208ENST00000537120 BSNDQ8WZ55 320 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 PLIN2Q99541 437 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 CCDC94Q9BW85 323 aaPredicted RBP9.23□□□□□ -0.93
DDB1-208ENST00000537120 VN1R3Q9BXE9 311 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 PDZD7Q9H5P4 517 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 KMT5AQ9NQR1 393 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDB1-208ENST00000537120 KCNG1Q9UIX4 513 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 ADAM28Q9UKQ2 775 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 ARID2Q68CP9 1835 aa9.23□□□□□ -0.93
DDB1-208ENST00000537120 VWA3AA6NCI4 1184 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 CASTOR2A6NHX0 329 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 PP2D1A8MPX8 630 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 C2CD4DB7Z1M9 353 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 INPPL1O15357 1258 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 TEX28O15482 410 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 LILRB3O75022 631 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 RECQL4O94761 1208 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 PRPHP41219 470 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 MATR3P43243 847 aaKnown RBP eCLIP9.22□□□□□ -0.93
DDB1-208ENST00000537120 SMTNP53814 917 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 DSG1Q02413 1049 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 CREMQ03060 361 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 DSC1Q08554 894 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 STRN3Q13033 797 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 DMP1Q13316 513 aaPredicted RBP9.22□□□□□ -0.93
DDB1-208ENST00000537120 TUSC3Q13454 348 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 FAM171A1Q5VUB5 890 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 KIAA0319Q5VV43 1072 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 CDCA2Q69YH5 1023 aaPredicted RBP9.22□□□□□ -0.93
DDB1-208ENST00000537120 FUT10Q6P4F1 479 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 CCDC149Q6ZUS6 474 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 BMP8AQ7Z5Y6 402 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 GPR149Q86SP6 731 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 UBALD2Q8IYN6 164 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 FBXL6Q8N531 539 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 IGSF22Q8N9C0 903 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 HASPINQ8TF76 798 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 B3GALT6Q96L58 329 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 DRC1Q96MC2 740 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 KIFC3Q9BVG8 833 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 GPR62Q9BZJ7 368 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 MFSD1Q9H3U5 465 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 MAN1C1Q9NR34 630 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.22□□□□□ -0.93
DDB1-208ENST00000537120 MARCH5Q9NX47 278 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 SORCS3Q9UPU3 1222 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 RBM19Q9Y4C8 960 aaKnown RBP9.22□□□□□ -0.93
DDB1-208ENST00000537120 SF3B1O75533 1304 aaKnown RBP eCLIP9.22□□□□□ -0.935e-6■■■■■ 72.7
DDB1-208ENST00000537120 MUC6Q6W4X9 2439 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 C5orf42Q9H799 3197 aa9.22□□□□□ -0.93
DDB1-208ENST00000537120 TDRD15B5MCY1 1934 aaKnown RBP9.21□□□□□ -0.93
DDB1-208ENST00000537120 TTLL13PA6NNM8 815 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 F8W810 466 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 STK25O00506 426 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 HIP1RO75146 1068 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 ASGR2P07307 311 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 HARSP12081 509 aaKnown RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 RPL17P18621 184 aaKnown RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 GBP2P32456 591 aaPredicted RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 UBA7P41226 1012 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 NPTX2P47972 431 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 OSTNP61366 133 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 RAD51AP2Q09MP3 1159 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 ELAVL2Q12926 359 aaKnown RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 MTMR3Q13615 1198 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 DHX8Q14562 1220 aaKnown RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 NT5DC1Q5TFE4 455 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 EEF1DP3Q658K8 133 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 RINT1Q6NUQ1 792 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 PDXDC1Q6P996 788 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 DCLRE1AQ6PJP8 1040 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 ZDHHC14Q8IZN3 488 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 SMG7Q92540 1137 aaKnown RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 STAMQ92783 540 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 CALML4Q96GE6 196 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 TTPALQ9BTX7 342 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 MRPL4Q9BYD3 311 aaKnown RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 NT5C3AQ9H0P0 336 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 KCNH6Q9H252 994 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 PLEKHA4Q9H4M7 779 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 RXFP1Q9HBX9 757 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 TOPORSQ9NS56 1045 aaPredicted RBP9.21□□□□□ -0.94
DDB1-208ENST00000537120 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 PHLPP2Q6ZVD8 1323 aa9.21□□□□□ -0.94
DDB1-208ENST00000537120 SLC16A4O15374 487 aa9.2□□□□□ -0.94
DDB1-208ENST00000537120 TGM5O43548 720 aa9.2□□□□□ -0.94
DDB1-208ENST00000537120 TRAPPC3O43617 180 aa9.2□□□□□ -0.94
DDB1-208ENST00000537120 B3GAT3O94766 335 aa9.2□□□□□ -0.94
DDB1-208ENST00000537120 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms