RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 C4BPAP04003 597 aaKnown RBP10.02□□□□□ -0.81
UBE3B-207ENST00000537063 MMEP08473 750 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 FAM153BP0C7A2 387 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 HSPA9P38646 679 aaKnown RBP10.02□□□□□ -0.81
UBE3B-207ENST00000537063 FAM153CQ494X1 144 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 CD302Q8IX05 232 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 IQCKQ8N0W5 287 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 PIK3R5Q8WYR1 880 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 DHX38Q92620 1227 aaKnown RBP10.02□□□□□ -0.81
UBE3B-207ENST00000537063 ALG3Q92685 438 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 HINFPQ9BQA5 517 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 FAM213AQ9BRX8 229 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 FAM204AQ9H8W3 233 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 FAM153AQ9UHL3 310 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 GTF3C4Q9UKN8 822 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 CSADQ9Y600 493 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 ESYT3A0FGR9 886 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 ADM5C9JUS6 153 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 KRIT1O00522 736 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 SOCS7O14512 581 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 CXCL11O14625 94 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 EDN1P05305 212 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 ITGA4P13612 1032 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 LIG4P49917 911 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 WNT7BP56706 349 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 PTENP60484 403 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 SP4Q02446 784 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 SMYD5Q6GMV2 418 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 C1orf131Q8NDD1 294 aaKnown RBP10.02□□□□□ -0.81
UBE3B-207ENST00000537063 CCDC113Q9H0I3 377 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 ALG6Q9Y672 507 aa10.02□□□□□ -0.81
UBE3B-207ENST00000537063 ANK1P16157 1881 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 A0A0B4J269 797 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 PEX10O60683 326 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 MAFO75444 373 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 LGR5O75473 907 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 CTNNA2P26232 953 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 PEX5P50542 639 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 PDE6CP51160 858 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 RNASE9P60153 205 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 NEDD9Q14511 834 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SLFN12LQ6IEE8 588 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 METTL7BQ6UX53 244 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 TATDN2Q93075 761 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 TMEM143Q96AN5 459 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 RNPC3Q96LT9 517 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 ZSWIM1Q9BR11 485 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 AP1M1Q9BXS5 423 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SEPT11Q9NVA2 429 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 PTPRJQ12913 1337 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 DNAJC25-GNG10A0A024R161 153 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 GOLGA8KD6RF30 607 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 FAM189A1O60320 539 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 DDNO94850 711 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 COPB2P35606 906 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 IREB2P48200 963 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 NLRP11P59045 1033 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 STRN3Q13033 797 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 PRKG1Q13976 671 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 PPP2R5EQ16537 467 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 PTPROQ16827 1216 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 CLEC16AQ2KHT3 1053 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 CDCA2Q69YH5 1023 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 DLK2Q6UY11 383 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SEPT14Q6ZU15 432 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 ZNF677Q86XU0 584 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 RIN2Q8WYP3 895 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 BICD1Q96G01 975 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 NAP1L3Q99457 506 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 UVRAGQ9P2Y5 699 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 AGO2Q9UKV8 859 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 CNTN6Q9UQ52 1028 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 CNTNAP2Q9UHC6 1331 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SHOX2O60902 331 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 VNN1O95497 513 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SLC25A27O95847 323 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 FGGP02679 453 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 UNGP13051 313 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 CAPSQ13938 189 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 TRADDQ15628 312 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 TDRD10Q5VZ19 366 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 FAM160B1Q5W0V3 765 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 ACAD10Q6JQN1 1059 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 ERO1BQ86YB8 467 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SLC7A3Q8WY07 619 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 DCPSQ96C86 337 aaKnown RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-207ENST00000537063 CTTNBP2NLQ9P2B4 639 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 AGTPBP1Q9UPW5 1226 aa10.01□□□□□ -0.81
UBE3B-207ENST00000537063 SORBS3O60504 671 aa10□□□□□ -0.81
UBE3B-207ENST00000537063 LDHAP00338 332 aaKnown RBP10□□□□□ -0.81
UBE3B-207ENST00000537063 ACO1P21399 889 aaKnown RBP10□□□□□ -0.81
UBE3B-207ENST00000537063 CTNNA1P35221 906 aaKnown RBP10□□□□□ -0.81
UBE3B-207ENST00000537063 GRM1Q13255 1194 aa10□□□□□ -0.81
UBE3B-207ENST00000537063 FAM167AQ96KS9 214 aa10□□□□□ -0.81
UBE3B-207ENST00000537063 CGRRF1Q99675 332 aa10□□□□□ -0.81
UBE3B-207ENST00000537063 DDX47Q9H0S4 455 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms