RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SMARCA1P28370 1054 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 GUCY1A2P33402 732 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 STAT2P52630 851 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 MRPS9P82933 396 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 FKBP3Q00688 224 aaKnown RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TSPY1Q01534 308 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 TRAPPC3LQ5T215 181 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 KLHDC7AQ5VTJ3 777 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 MYLK4Q86YV6 388 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 SCFD2Q8WU76 684 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 ERP44Q9BS26 406 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 RMI1Q9H9A7 625 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 NPHS2Q9NP85 383 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 NIP7Q9Y221 180 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTPRD-213ENST00000537002 USP20Q9Y2K6 914 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 DUSP10Q9Y6W6 482 aa5.73□□□□□ -1.49
PTPRD-213ENST00000537002 CYTH3O43739 400 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 LDHBP07195 334 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RFX1P22670 979 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 COPB2P35606 906 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RFC5P40937 340 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 NTRK3Q16288 839 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ANO7Q6IWH7 933 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RFX6Q8HWS3 928 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 LCORLQ8N3X6 602 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SMYD1Q8NB12 490 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 DRC3Q9H069 523 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 FAM96AQ9H5X1 160 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SLC52A2Q9HAB3 445 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 TRPV5Q9NQA5 729 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 HAO1Q9UJM8 370 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 GOLGA8SH3BPF8 625 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 GOLGA8MH3BSY2 632 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 STAM2O75886 525 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CDK7P50613 346 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ALDH18A1P54886 795 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 BASP1P80723 227 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 MAPKAPK5Q8IW41 473 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 LENG1Q96BZ8 264 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SCYL1Q96KG9 808 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SIKE1Q9BRV8 207 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PARVBQ9HBI1 364 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 K7ENM7 598 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RARAP10276 462 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CPA2P48052 419 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 HSPA13P48723 471 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 JADE1Q6IE81 842 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PODNQ7Z5L7 613 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ADGRG6Q86SQ4 1221 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PNMA1Q8ND90 353 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 EPS8L3Q8TE67 593 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ASCC2Q9H1I8 757 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PIH1D3Q9NQM4 214 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 EMILIN3Q9NT22 766 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 DNAAF2Q9NVR5 837 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 EXOC7Q9UPT5 735 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 FIS1Q9Y3D6 152 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PALM3A6NDB9 673 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 MATN2O00339 956 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CSDE1O75534 798 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PHKA1P46020 1223 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 POLGP54098 1239 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ERVK-9P63128 1117 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RCN1Q15293 331 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 DNAL1Q4LDG9 190 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 KIAA1755Q5JYT7 1200 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ANO5Q75V66 913 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 NUDCD3Q8IVD9 361 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RASGEF1CQ8N431 466 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SCFD1Q8WVM8 642 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 C1orf54Q8WWF1 131 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SPATA16Q9BXB7 569 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 TRPV6Q9H1D0 765 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 GOLPH3Q9H4A6 298 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SPC25Q9HBM1 224 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 LMCD1Q9NZU5 365 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 BTBD7Q9P203 1132 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 HEG1Q9ULI3 1381 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 MCF2LO15068 1137 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 TTC4O95801 387 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 NDUFA5Q16718 116 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 WDR78Q5VTH9 848 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ATG16L1Q676U5 607 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ANKRD40Q6AI12 368 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 TTI2Q6NXR4 508 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC137Q6PK04 289 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RHOT2Q8IXI1 618 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 C4orf33Q8N1A6 199 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 RBM46Q8TBY0 533 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ALKBH8Q96BT7 664 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 TUBGCP5Q96RT8 1024 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 UBE2TQ9NPD8 197 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PARP4Q9UKK3 1724 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 STXBP5LQ9Y2K9 1186 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PHRF1Q9P1Y6 1649 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 OAS1P00973 400 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PLEKP08567 350 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CD19P15391 556 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 DSG1Q02413 1049 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms