RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 DCLRE1BQ9H816 532 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 MLXIPLQ9NP71 852 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 CTTNBP2NLQ9P2B4 639 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 HAO1Q9UJM8 370 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PCDHA12Q9UN75 941 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 NIP7Q9Y221 180 aaKnown RBP eCLIP7.41□□□□□ -1.22
CPSF7-215ENST00000536145 SLC4A7Q9Y6M7 1214 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 NUMBLQ9Y6R0 609 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 TAF1P21675 1872 aa7.41□□□□□ -1.22
CPSF7-215ENST00000536145 PNMA6FA0A0J9YX94 578 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 MAGEA13PA6NCF6 341 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 EIF4E1BA6NMX2 242 aaKnown RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 C2CD2LO14523 706 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 EIF3DO15371 548 aaKnown RBP eCLIP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 DCTN3O75935 186 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 TJP3O95049 919 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 ECEL1O95672 775 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PENKP01210 267 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PDHA1P08559 390 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 ABCB4P21439 1286 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 RFX1P22670 979 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 TARSP26639 723 aaKnown RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 POLD1P28340 1107 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 EPHB2P29323 1055 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 HSPA1LP34931 641 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 TNNI2P48788 182 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PSMC6P62333 389 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 GPC5P78333 572 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 IL9RQ01113 521 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 DYNC1I2Q13409 638 aaKnown RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 CUL3Q13618 768 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 STAT4Q14765 748 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 TNIP1Q15025 636 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 GRIK5Q16478 980 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PDK4Q16654 411 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 ERFEQ4G0M1 354 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 CBWD6Q4V339 395 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 KHDC1Q4VXA5 237 aaKnown RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 SLC45A4Q5BKX6 768 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 DCAF17Q5H9S7 520 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 CBWD3Q5JTY5 395 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 CBWD5Q5RIA9 395 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 RNF220Q5VTB9 566 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 TRIM68Q6AZZ1 485 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 RFWD3Q6PCD5 774 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 RNF207Q6ZRF8 634 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 OTUD6AQ7L8S5 288 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 ZNF804AQ7Z570 1209 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 ARHGAP22Q7Z5H3 698 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 TRABD2AQ86V40 505 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 VSIG1Q86XK7 387 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 FAM186BQ8IYM0 893 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 ZNF276Q8N554 614 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 ETNPPLQ8TBG4 499 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 SLC20A1Q8WUM9 679 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PTPRN2Q92932 1015 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PTCD3Q96EY7 689 aaKnown RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 CEP95Q96GE4 821 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 RBM41Q96IZ5 413 aaKnown RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 FIZ1Q96SL8 496 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 REEP2Q9BRK0 252 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 RUSC1Q9BVN2 902 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 RTFDC1Q9BY42 306 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 CADM1Q9BY67 442 aaKnown RBP7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PITPNM3Q9BZ71 974 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 FOXP3Q9BZS1 431 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 DCLK3Q9C098 648 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 VCXQ9H320 206 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 JMJD4Q9H9V9 463 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 VAT1LQ9HCJ6 419 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 KCNK9Q9NPC2 374 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 UBN1Q9NPG3 1134 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 OLFML3Q9NRN5 406 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 STK32BQ9NY57 414 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 NKIRAS1Q9NYS0 192 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 DLGAP2Q9P1A6 1054 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 STOML1Q9UBI4 398 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 MTUS1Q9ULD2 1270 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 GRID1Q9ULK0 1009 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 PHTF1Q9UMS5 762 aa7.4□□□□□ -1.22
CPSF7-215ENST00000536145 TAF1LQ8IZX4 1826 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 UBE4BO95155 1302 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 A0A1B0GVG6 124 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 FAM47DPA6NHR8 397 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 RSPH10B2B2RC85 870 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 FOXN3O00409 490 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 TBX3O15119 743 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 RGL2O15211 777 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 DNAJC6O75061 913 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ATP9AO75110 1047 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 CDH16O75309 829 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ENTPD5O75356 428 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 ACSL3O95573 720 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 FTLP02792 175 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 CYP1A1P04798 512 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-215ENST00000536145 RSPH10BP0C881 870 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 FGFR1P11362 822 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 GAP43P17677 238 aa7.39□□□□□ -1.23
CPSF7-215ENST00000536145 MARK3P27448 753 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms