RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 FAM213AQ9BRX8 229 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
CNN1-202ENST00000535659 NXF3Q9H4D5 531 aaKnown RBP16.98■□□□□ 0.31
CNN1-202ENST00000535659 TMEM161AQ9NX61 479 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 CPSF3Q9UKF6 684 aaKnown RBP16.98■□□□□ 0.31
CNN1-202ENST00000535659 PCDHB7Q9Y5E2 793 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 CAVIN2O95810 425 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 AMHP03971 560 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 IBSPP21815 317 aaPredicted RBP16.97■□□□□ 0.31
CNN1-202ENST00000535659 ZNF165P49910 485 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 WDR5P61964 334 aaKnown RBP16.97■□□□□ 0.31
CNN1-202ENST00000535659 HSP90AA2PQ14568 343 aaPredicted RBP16.97■□□□□ 0.31
CNN1-202ENST00000535659 ZBTB41Q5SVQ8 909 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 CRELD2Q6UXH1 353 aaPredicted RBP16.97■□□□□ 0.31
CNN1-202ENST00000535659 CRIPAKQ8N1N5 446 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 CSGALNACT2Q8N6G5 542 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 RDH13Q8NBN7 331 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 RNF169Q8NCN4 708 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
CNN1-202ENST00000535659 TOP1MTQ969P6 601 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 SRRTQ9BXP5 876 aaKnown RBP16.97■□□□□ 0.31
CNN1-202ENST00000535659 UBN1Q9NPG3 1134 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 PARP2Q9UGN5 583 aa16.97■□□□□ 0.31
CNN1-202ENST00000535659 ZNF233A6NK53 670 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 ZBBXA8MT70 800 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 ATF7P17544 494 aaPredicted RBP16.96■□□□□ 0.31
CNN1-202ENST00000535659 AKAP5P24588 427 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 TNFSF9P41273 254 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 KCNJ6P48051 423 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 POU5F1Q01860 360 aaKnown RBP16.96■□□□□ 0.31
CNN1-202ENST00000535659 TPD52L1Q16890 204 aaPredicted RBP16.96■□□□□ 0.31
CNN1-202ENST00000535659 SPATA1Q5VX52 437 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 CEP135Q66GS9 1140 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 FILIP1Q7Z7B0 1213 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 ZC3H3Q8IXZ2 948 aaKnown RBP16.96■□□□□ 0.31
CNN1-202ENST00000535659 TMEM192Q8IY95 271 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 LPPQ93052 612 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 EEF2KMTQ96G04 330 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 BPIFA3Q9BQP9 254 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 APOL6Q9BWW8 343 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 UBE2OQ9C0C9 1292 aaKnown RBP16.96■□□□□ 0.31
CNN1-202ENST00000535659 MTIF3Q9H2K0 278 aaKnown RBP16.96■□□□□ 0.31
CNN1-202ENST00000535659 TSPY26PQ9H489 355 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 LRFN2Q9ULH4 789 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 FRMD4BQ9Y2L6 1034 aa16.96■□□□□ 0.31
CNN1-202ENST00000535659 FGFR1OPO95684 399 aaKnown RBP16.96■□□□□ 0.3
CNN1-202ENST00000535659 PSMC2P35998 433 aaKnown RBP16.96■□□□□ 0.3
CNN1-202ENST00000535659 CASP4P49662 377 aa16.96■□□□□ 0.3
CNN1-202ENST00000535659 YARSP54577 528 aaKnown RBP16.96■□□□□ 0.3
CNN1-202ENST00000535659 SNRNP35Q16560 246 aaKnown RBP16.96■□□□□ 0.3
CNN1-202ENST00000535659 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.3
CNN1-202ENST00000535659 CBWD2Q8IUF1 395 aa16.96■□□□□ 0.3
CNN1-202ENST00000535659 NPAS4Q8IUM7 802 aa16.96■□□□□ 0.3
CNN1-202ENST00000535659 CEP63Q96MT8 703 aa16.96■□□□□ 0.3
CNN1-202ENST00000535659 RPF1Q9H9Y2 349 aaKnown RBP16.96■□□□□ 0.3
CNN1-202ENST00000535659 CXXC1Q9P0U4 656 aaPredicted RBP16.96■□□□□ 0.3
CNN1-202ENST00000535659 GIT1Q9Y2X7 761 aa16.96■□□□□ 0.3
CNN1-202ENST00000535659 SLC4A7Q9Y6M7 1214 aa16.96■□□□□ 0.3
CNN1-202ENST00000535659 MEIS3P2A8K0S8 358 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 AKAP3O75969 853 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 UPP2O95045 317 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 DEFB103AP81534 67 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 SHHQ15465 462 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 ENOX2Q16206 610 aaKnown RBP16.95■□□□□ 0.3
CNN1-202ENST00000535659 SLC10A6Q3KNW5 377 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 RASIP1Q5U651 963 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 LRRC55Q6ZSA7 311 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 MKNK1Q9BUB5 465 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
CNN1-202ENST00000535659 TOPORSQ9NS56 1045 aaPredicted RBP16.95■□□□□ 0.3
CNN1-202ENST00000535659 IKBKBO14920 756 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 MAPK13O15264 365 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 RECQL4O94761 1208 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 ADRB2P07550 413 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 BMP8BP34820 402 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 MYL5Q02045 173 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 C9orf50Q5SZB4 431 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 PHOSPHO2Q8TCD6 241 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 MFSD14AQ96MC6 490 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 RSAD1Q9HA92 442 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 RBAKQ9NYW8 714 aaPredicted RBP16.94■□□□□ 0.3
CNN1-202ENST00000535659 KLK14Q9P0G3 267 aa16.94■□□□□ 0.3
CNN1-202ENST00000535659 COLQQ9Y215 455 aaPredicted RBP16.94■□□□□ 0.3
CNN1-202ENST00000535659 TTC26A0AVF1 554 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 SMTNL1A8MU46 457 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 LACTBL1A8MY62 500 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 SLC16A3O15427 465 aaKnown RBP16.93■□□□□ 0.3
CNN1-202ENST00000535659 HOXA2O43364 376 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 OFD1O75665 1012 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 GNA14O95837 355 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 CXCL8P10145 99 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 BRSK2Q8IWQ3 736 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 CD302Q8IX05 232 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 FAM186BQ8IYM0 893 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 FAM212AQ96EL1 285 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 GAD1Q99259 594 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 THAP9Q9H5L6 903 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 CBX8Q9HC52 389 aa16.93■□□□□ 0.3
CNN1-202ENST00000535659 NFE2L3Q9Y4A8 694 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms