RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 AMACRQ9UHK6 382 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 LRFN2Q9ULH4 789 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 APOEP02649 317 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 PMS2P54278 862 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 Q4G0T1 1027 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 ANKRD20A4Q4UJ75 823 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 ANKRD20A8PQ5CZ79 823 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 ANKRD20A2Q5SQ80 823 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 ANKRD20A1Q5TYW2 823 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 RDM1Q8NG50 284 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 GPRASP2Q96D09 838 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 SEMA6BQ9H3T3 888 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 ZCCHC17Q9NP64 241 aaKnown RBP18.3■□□□□ 0.52
PHRF1-206ENST00000534320 PARVAQ9NVD7 372 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 RSPH10B2B2RC85 870 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 LPXNO60711 386 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 RSPH10BP0C881 870 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 BIRC2Q13490 618 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 RUBCNQ92622 972 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 SARSP49591 514 aaKnown RBP18.29■□□□□ 0.52
PHRF1-206ENST00000534320 PDCLQ13371 301 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 ARL13BQ3SXY8 428 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 AGPAT3Q9NRZ7 376 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 KRT7P08729 469 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 RFC5P40937 340 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 NT5DC1Q5TFE4 455 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 PCSK1NQ9UHG2 260 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 SSTR3P32745 418 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-206ENST00000534320 DHX34Q14147 1143 aaKnown RBP18.29■□□□□ 0.52
PHRF1-206ENST00000534320 TADA2BQ86TJ2 420 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 FAF2Q96CS3 445 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 CFAP36Q96G28 342 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 SMARCAD1Q9H4L7 1026 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 IPO11Q9UI26 975 aaKnown RBP18.29■□□□□ 0.52
PHRF1-206ENST00000534320 MRC1P22897 1456 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 SDC4P31431 198 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 ARL4CP56559 192 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 TRIM42Q8IWZ5 723 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 ZKSCAN4Q969J2 545 aaPredicted RBP18.29■□□□□ 0.52
PHRF1-206ENST00000534320 NOP53Q9NZM5 478 aaKnown RBP18.29■□□□□ 0.52
PHRF1-206ENST00000534320 SATB2Q9UPW6 733 aa18.29■□□□□ 0.52
PHRF1-206ENST00000534320 P4HA2O15460 535 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 CTIFO43310 598 aaKnown RBP18.28■□□□□ 0.52
PHRF1-206ENST00000534320 KYAT1Q16773 422 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 CENPPQ6IPU0 288 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 SLC30A5Q8TAD4 765 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 GDAP1Q8TB36 358 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 UVRAGQ9P2Y5 699 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 IGSF9BQ9UPX0 1349 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 ARP10275 920 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 GIT2Q14161 759 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 ANKRD7Q92527 254 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 SLC12A6Q9UHW9 1150 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 MUTP22033 750 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 CA4P22748 312 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 SH3GL3Q99963 347 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 TMEM8AQ9HCN3 771 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 PEAK1Q9H792 1746 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 SMIM22K7EJ46 135 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 PDZD8Q8NEN9 1154 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 KIF12Q96FN5 646 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 KLC2Q9H0B6 622 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 TFR2Q9UP52 801 aa18.28■□□□□ 0.52
PHRF1-206ENST00000534320 AKAP12Q02952 1782 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 SLC1A1P43005 524 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 WDR72Q3MJ13 1102 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 APOBEC3HQ6NTF7 200 aaKnown RBP18.27■□□□□ 0.52
PHRF1-206ENST00000534320 C15orf52Q6ZUT6 534 aaKnown RBP18.27■□□□□ 0.52
PHRF1-206ENST00000534320 BBS5Q8N3I7 341 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 ARMC2Q8NEN0 867 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 C1orf54Q8WWF1 131 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 CCDC68Q9H2F9 335 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 SLC24A3Q9HC58 644 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 CYTH3O43739 400 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 PLEKP08567 350 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-206ENST00000534320 ARPP19P56211 112 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 NCOA4Q13772 614 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 NXNQ6DKJ4 435 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 RAPH1Q70E73 1250 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 PCGF5Q86SE9 256 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 RNF139Q8WU17 664 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 DDX56Q9NY93 547 aaKnown RBP18.27■□□□□ 0.52
PHRF1-206ENST00000534320 MAP3K20Q9NYL2 800 aaKnown RBP18.27■□□□□ 0.52
PHRF1-206ENST00000534320 MAP3K7O43318 606 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 SLC25A27O95847 323 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 TAP1Q03518 808 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 LCA5Q86VQ0 697 aa18.27■□□□□ 0.52
PHRF1-206ENST00000534320 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.27■□□□□ 0.52
PHRF1-206ENST00000534320 TTC7AQ9ULT0 858 aaPredicted RBP18.27■□□□□ 0.52
PHRF1-206ENST00000534320 A0A087X0B3 334 aa18.27■□□□□ 0.51
PHRF1-206ENST00000534320 KLRC1P26715 233 aa18.27■□□□□ 0.51
PHRF1-206ENST00000534320 COL9A3Q14050 684 aaPredicted RBP18.27■□□□□ 0.51
PHRF1-206ENST00000534320 HIBCHQ6NVY1 386 aaPredicted RBP18.27■□□□□ 0.51
PHRF1-206ENST00000534320 ST13P4Q8IZP2 240 aaPredicted RBP18.27■□□□□ 0.51
PHRF1-206ENST00000534320 HEY1Q9Y5J3 304 aa18.27■□□□□ 0.51
PHRF1-206ENST00000534320 FIGNQ5HY92 759 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 SDCCAG3Q96C92 435 aa18.26■□□□□ 0.51
PHRF1-206ENST00000534320 MAGED2Q9UNF1 606 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms