RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 LRRC71Q8N4P6 559 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 DNAJB3Q8WWF6 145 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 PRPF31Q8WWY3 499 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 ZBTB10Q96DT7 871 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 NFKBIZQ9BYH8 718 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 KIAA1586Q9HCI6 787 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 ATP13A2Q9NQ11 1180 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 PRKAG2Q9UGJ0 569 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 AKT3Q9Y243 479 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 EVPLQ92817 2033 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 ITIH6Q6UXX5 1313 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 A0A1W2PQC6 194 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 LGALS16A8MUM7 142 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 M0QZ92 97 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 MAPK13O15264 365 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 AP5Z1O43299 807 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 EXOC3O60645 756 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 KRT13P13646 458 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 GLRA2P23416 452 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 THPOP40225 353 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 LIG4P49917 911 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 CLCN3P51790 818 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 UBXN1Q04323 297 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 LAMTOR4Q0VGL1 99 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 NR1I3Q14994 352 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 PCBP1Q15365 356 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 MAPK6Q16659 721 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 RUFY4Q6ZNE9 571 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 INTS8Q75QN2 995 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 VSTM4Q8IW00 320 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 LINC01465Q8N7H1 131 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 ZSCAN1Q8NBB4 408 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 SPC24Q8NBT2 197 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 CCDC150Q8NCX0 1101 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 DPF3Q92784 378 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 HIPK3Q9H422 1215 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 POLD4Q9HCU8 107 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 TAB2Q9NYJ8 693 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 TGFB1I1O43294 461 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 CKBP12277 381 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 GARTP22102 1010 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 RBL2Q08999 1139 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 NCBP1Q09161 790 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 CETN1Q12798 172 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 DRP2Q13474 957 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 CDCA2Q69YH5 1023 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 ZPBP2Q6X784 338 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 TMC6Q7Z403 805 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 APBB1IPQ7Z5R6 666 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 ZNF410Q86VK4 478 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 PPFIBP1Q86W92 1011 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 IRF2BP1Q8IU81 584 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 RHPN2Q8IUC4 686 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 FAM186BQ8IYM0 893 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 XXYLT1Q8NBI6 393 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 RNF149Q8NC42 400 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 SCLT1Q96NL6 688 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 NUP58Q9BVL2 599 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 MRPL4Q9BYD3 311 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 VPS16Q9H269 839 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 PRDM5Q9NQX1 630 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 TBX21Q9UL17 535 aa11.92□□□□□ -0.5
CCDC90B-218ENST00000533761 ZMYM2Q9UBW7 1377 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 KIAA0355O15063 1070 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 STX10O60499 249 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 PARNO95453 639 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 LDHAP00338 332 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 VTNP04004 478 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 SFPQP23246 707 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 HOXD13P35453 343 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 NLRP11P59045 1033 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 ENPEPQ07075 957 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 KCNA1Q09470 495 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 CAPSQ13938 189 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 ASAP3Q8TDY4 903 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 BSNDQ8WZ55 320 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 POMGNT1Q8WZA1 660 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 NLRP4Q96MN2 994 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 NAP1L5Q96NT1 182 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 INO80BQ9C086 356 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 NDST4Q9H3R1 872 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
CCDC90B-218ENST00000533761 CLIC2O15247 247 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 N4BP1O75113 896 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 PIGRP01833 764 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 SRGAP2CP0DJJ0 459 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 RAG1P15918 1043 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 SELPP16109 830 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 CYP2J2P51589 502 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 TMEM132AQ24JP5 1023 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 TRIM71Q2Q1W2 868 aaKnown RBP11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 ZNF618Q5T7W0 954 aa11.9□□□□□ -0.5
CCDC90B-218ENST00000533761 APTXQ7Z2E3 356 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms