RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 STBD1O95210 358 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 SGPL1O95470 568 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 CHRNB2P17787 502 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 MAN1A1P33908 653 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 USP8P40818 1118 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 FNTAP49354 379 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 GNGT1P63211 74 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 FMO1Q01740 532 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 STRN3Q13033 797 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 PRPF4BQ13523 1007 aaKnown RBP12.85□□□□□ -0.35
ATM-222ENST00000533733 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
ATM-222ENST00000533733 DCAF12L1Q5VU92 463 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 DUPD1Q68J44 220 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 ACAD10Q6JQN1 1059 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 B4GALNT4Q76KP1 1039 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 TMC3Q7Z5M5 1100 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 C12orf50Q8NA57 414 aaPredicted RBP12.85□□□□□ -0.35
ATM-222ENST00000533733 CD101Q93033 1021 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 C1orf112Q9NSG2 853 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 CYP39A1Q9NYL5 469 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 MTRF1LQ9UGC7 380 aaKnown RBP12.85□□□□□ -0.35
ATM-222ENST00000533733 FBXO40Q9UH90 709 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 LCMT1Q9UIC8 334 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 RRP15Q9Y3B9 282 aaKnown RBP12.85□□□□□ -0.35
ATM-222ENST00000533733 PTPRFP10586 1907 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 H0YGN5 161 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 DAPK3O43293 454 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 ATG7O95352 703 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 KRT14P02533 472 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 SUPT20HL2P0C7V6 817 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 ITGA4P13612 1032 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 SLC1A1P43005 524 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 ACTR2P61160 394 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 PRKCEQ02156 737 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 PSMD6Q15008 389 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 STXBP2Q15833 593 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 SUPT20HL1Q3ZLR7 823 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 SH3D19Q5HYK7 790 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 C15orf39Q6ZRI6 1047 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 CYFIP1Q7L576 1253 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 HOOK3Q86VS8 718 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 PALB2Q86YC2 1186 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 ZNF653Q96CK0 615 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 BICD1Q96G01 975 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 WRNIP1Q96S55 665 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
ATM-222ENST00000533733 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 NFS1Q9Y697 457 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 GRIN2DO15399 1336 aa12.85□□□□□ -0.35
ATM-222ENST00000533733 GOLGA8IPA6NC78 632 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 GOLGA8JA6NMD2 632 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 CYP26A1O43174 497 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 ZNF862O60290 1169 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 RFC5P40937 340 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 NAMPTP43490 491 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 PEX5P50542 639 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 AP3M2P53677 418 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 RWDD2BP57060 319 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 CLEC16AQ2KHT3 1053 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 SWSAP1Q6NVH7 229 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 SYDE1Q6ZW31 735 aaPredicted RBP12.84□□□□□ -0.35
ATM-222ENST00000533733 SV2AQ7L0J3 742 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 DNAAF5Q86Y56 855 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 EXOC8Q8IYI6 725 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 BCAS4Q8TDM0 211 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 CCDC127Q96BQ5 260 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 VCPIP1Q96JH7 1222 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 PAGR1Q9BTK6 254 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 TRPC6Q9Y210 931 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 RIPK3Q9Y572 518 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 PCDHB2Q9Y5E7 798 aa12.84□□□□□ -0.35
ATM-222ENST00000533733 SPOPO43791 374 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 NUDT17P0C025 328 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 COMTP21964 271 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 LIG4P49917 911 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 SLMAPQ14BN4 828 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 SLC39A4Q6P5W5 647 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 MICALCLQ6ZW33 695 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 SLC47A2Q86VL8 602 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 JAMLQ86YT9 394 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 TAS1R2Q8TE23 839 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
ATM-222ENST00000533733 ALG3Q92685 438 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 SEMA4DQ92854 862 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 SLCO2A1Q92959 643 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 SAAL1Q96ER3 474 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 PCDHB18PQ96TA0 734 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 TXLNGYQ9BZA5 131 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 POLR3FQ9H1D9 316 aaPredicted RBP12.83□□□□□ -0.36
ATM-222ENST00000533733 TMEM134Q9H6X4 195 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.36
ATM-222ENST00000533733 XPNPEP1Q9NQW7 623 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 RSPH14Q9UHP6 348 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 FEZ2Q9UHY8 353 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms