RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 ANKRD42Q8N9B4 389 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ANKS1AQ92625 1134 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 SAMSN1Q9NSI8 373 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 PGK2P07205 417 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ALDH1A3P47895 512 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 RBL2Q08999 1139 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 FBXO16Q8IX29 292 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 MGARPQ8TDB4 240 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 PPP4R1Q8TF05 950 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 MED15Q96RN5 788 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 CNOT8Q9UFF9 292 aaKnown RBP11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 MAD1L1Q9Y6D9 718 aa11.99□□□□□ -0.49
AMBRA1-211ENST00000533727 ADCY3O60266 1144 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 TJP3O95049 919 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ODC1P11926 461 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 GRIK1P39086 918 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 PRCPP42785 496 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 CLCN6P51797 869 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 GPC5P78333 572 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ZBTB17Q13105 803 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ZKSCAN8Q15776 578 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 Q4G0T1 1027 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ANKRD23Q86SG2 305 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 SKA2Q8WVK7 121 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 MAGEB5Q9BZ81 275 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 TJP2Q9UDY2 1190 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 DSEQ9UL01 958 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 H3BRJ5 948 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 EXTL3O43909 919 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 CPP00450 1065 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ZBTB48P10074 688 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 TAF6P49848 677 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ST8SIA6P61647 398 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 HSP90AA5PQ58FG0 334 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ILDR1Q86SU0 546 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 MRPL9Q9BYD2 267 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 EMSYQ7Z589 1322 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 EGFRP00533 1210 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 PAMP19021 973 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 DBN1Q16643 649 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ZNF394Q53GI3 561 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 WNK4Q96J92 1243 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 YME1L1Q96TA2 773 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 IP6K2Q9UHH9 426 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 NRBP1Q9UHY1 535 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 PCDHB12Q9Y5F1 795 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 TCRBV5S4A2TA0A5A2 114 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 MSH4O15457 936 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ECEL1O95672 775 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 LRG1P02750 347 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 ADORA2BP29275 332 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 SERPINB6P35237 376 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 PSMC1P62191 440 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 IRX5P78411 483 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 WDR72Q3MJ13 1102 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 CATSPERGQ6ZRH7 1159 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 C11orf57Q6ZUT1 292 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 CCDC197Q8NCU1 140 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.492e-9■■■■■ 38.6
AMBRA1-211ENST00000533727 TTC25Q96NG3 672 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 APBA2Q99767 749 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 REEP2Q9BRK0 252 aa11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 TRIM56Q9BRZ2 755 aaKnown RBP11.98□□□□□ -0.49
AMBRA1-211ENST00000533727 H3BRB1 525 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 AMHP03971 560 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 ATP8B4Q8TF62 1192 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 TUT1Q9H6E5 874 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 TMEM39AQ9NV64 488 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 DDX56Q9NY93 547 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 MID2Q9UJV3 735 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 SNX9Q9Y5X1 595 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 MROH7Q68CQ1 1323 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 NEMP1O14524 444 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 MAP3K7O43318 606 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 URODP06132 367 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 PNMA6AP0CW24 399 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 NMT1P30419 496 aaKnown RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 AXLP30530 894 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 ALDH5A1P51649 535 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 LRRC23Q53EV4 343 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 FBXO38Q6PIJ6 1188 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 MKL1Q969V6 931 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 SLITRK1Q96PX8 696 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 Q9H521 79 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 NHEJ1Q9H9Q4 299 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 NFAT5O94916 1531 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 PP2D1A8MPX8 630 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 YWHAGP61981 247 aaKnown RBP eCLIP11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 ITPRIPL1Q6GPH6 555 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 TLK2Q86UE8 772 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 C4orf19Q8IY42 314 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 VGLL2Q8N8G2 317 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 PARD3BQ8TEW8 1205 aa11.97□□□□□ -0.49
AMBRA1-211ENST00000533727 ROBO1Q9Y6N7 1651 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms