RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SKIP12755 728 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 ACTN1P12814 892 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 TNFSF9P41273 254 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 OSTNP61366 133 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 MYL5Q02045 173 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 NCAPHQ15003 741 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 ENOX2Q16206 610 aaKnown RBP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 KYAT1Q16773 422 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 CEP135Q66GS9 1140 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 PSRC1Q6PGN9 363 aaPredicted RBP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 OTOP2Q7RTS6 562 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 IRF2BP1Q8IU81 584 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 CBWD2Q8IUF1 395 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 CRIPAKQ8N1N5 446 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 RDH13Q8NBN7 331 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 NOC3LQ8WTT2 800 aaKnown RBP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 LPPQ93052 612 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 CEP63Q96MT8 703 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 APOL6Q9BWW8 343 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 KIAA1586Q9HCI6 787 aa12.98□□□□□ -0.33
COMMD9-208ENST00000533643 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
COMMD9-208ENST00000533643 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 IKBKBO14920 756 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 MAPK13O15264 365 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 RECQL4O94761 1208 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 BAIAP3O94812 1187 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 FGFR1OPO95684 399 aaKnown RBP12.97□□□□□ -0.33
COMMD9-208ENST00000533643 EOMESO95936 686 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 ITGA4P13612 1032 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 AKAP5P24588 427 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
COMMD9-208ENST00000533643 SNRNP35Q16560 246 aaKnown RBP12.97□□□□□ -0.33
COMMD9-208ENST00000533643 TPD52L1Q16890 204 aaPredicted RBP12.97□□□□□ -0.33
COMMD9-208ENST00000533643 AGMOQ6ZNB7 445 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 FILIP1Q7Z7B0 1213 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 GAS2L3Q86XJ1 694 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 FAM186BQ8IYM0 893 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 RNF169Q8NCN4 708 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 FAM200AQ8TCP9 573 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 HERVK_113Q902F9 699 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 BORCS6Q96GS4 357 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 MFSD14AQ96MC6 490 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
COMMD9-208ENST00000533643 THAP9Q9H5L6 903 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 ELAC1Q9H777 363 aaKnown RBP12.97□□□□□ -0.33
COMMD9-208ENST00000533643 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
COMMD9-208ENST00000533643 SMTNL1A8MU46 457 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 SLC16A3O15427 465 aaKnown RBP12.96□□□□□ -0.33
COMMD9-208ENST00000533643 CXCL8P10145 99 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.33
COMMD9-208ENST00000533643 DEFB103AP81534 67 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 POU5F1Q01860 360 aaKnown RBP12.96□□□□□ -0.33
COMMD9-208ENST00000533643 CYP24A1Q07973 514 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 HSP90AA2PQ14568 343 aaPredicted RBP12.96□□□□□ -0.33
COMMD9-208ENST00000533643 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 ALKAL1Q6UXT8 129 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 LUZP1Q86V48 1076 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 BRSK2Q8IWQ3 736 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 HACE1Q8IYU2 909 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 CXCL16Q9H2A7 254 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 HSD3B7Q9H2F3 369 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 RPF1Q9H9Y2 349 aaKnown RBP12.96□□□□□ -0.33
COMMD9-208ENST00000533643 SAMSN1Q9NSI8 373 aaKnown RBP12.96□□□□□ -0.33
COMMD9-208ENST00000533643 FANCLQ9NW38 375 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 TMEM161AQ9NX61 479 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 KLK14Q9P0G3 267 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 CXXC1Q9P0U4 656 aaPredicted RBP12.96□□□□□ -0.33
COMMD9-208ENST00000533643 PARP2Q9UGN5 583 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 PCDHB7Q9Y5E2 793 aa12.96□□□□□ -0.33
COMMD9-208ENST00000533643 TTC26A0AVF1 554 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 ZBBXA8MT70 800 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 BECN2A8MW95 431 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 LACTBL1A8MY62 500 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 AMHP03971 560 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 EPB41P11171 864 aaKnown RBP12.95□□□□□ -0.34
COMMD9-208ENST00000533643 WNT7BP56706 349 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
COMMD9-208ENST00000533643 HSP90AA4PQ58FG1 418 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 CLLU1OSQ5K130 101 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 RASIP1Q5U651 963 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 CDKAL1Q5VV42 579 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 FRMD5Q7Z6J6 570 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 NPAS4Q8IUM7 802 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 PLEKHO2Q8TD55 490 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 TOP1MTQ969P6 601 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 SNX27Q96L92 541 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 GDF15Q99988 308 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 PLEKHA5Q9HAU0 1116 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 UBN1Q9NPG3 1134 aa12.95□□□□□ -0.34
COMMD9-208ENST00000533643 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms