RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 LAMTOR4Q0VGL1 99 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PCBP1Q15365 356 aaKnown RBP eCLIP8.71□□□□□ -1.02
NXF1-215ENST00000533440 CSRP2Q16527 193 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 LPAL2Q16609 132 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 UVSSAQ2YD98 709 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PPM1LQ5SGD2 360 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 LIN9Q5TKA1 542 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PLA2G4FQ68DD2 849 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PRSS55Q6UWB4 352 aaPredicted RBP8.71□□□□□ -1.02
NXF1-215ENST00000533440 PRR23CQ6ZRP0 262 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 EXOC8Q8IYI6 725 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 LNX1Q8TBB1 728 aaPredicted RBP8.71□□□□□ -1.02
NXF1-215ENST00000533440 BICD2Q8TD16 824 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PSPC1Q8WXF1 523 aaKnown RBP8.71□□□□□ -1.02
NXF1-215ENST00000533440 SLC7A3Q8WY07 619 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 DDX1Q92499 740 aaKnown RBP8.71□□□□□ -1.02
NXF1-215ENST00000533440 TCEANC2Q96MN5 208 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 IER2Q9BTL4 223 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PLA2G2FQ9BZM2 168 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 CHRDQ9H2X0 955 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 HEBP1Q9NRV9 189 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 SEMA4GQ9NTN9 838 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 ANGPTL2Q9UKU9 493 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 HES2Q9Y543 173 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 PPME1Q9Y570 386 aa8.71□□□□□ -1.02
NXF1-215ENST00000533440 SPEGQ15772 3267 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 KLF18A0A0U1RQI7 1052 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 CCL16O15467 120 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 ASAP2O43150 1006 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 PRPF3O43395 683 aaKnown RBP8.7□□□□□ -1.02
NXF1-215ENST00000533440 GDF9O60383 454 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 TSPAN1O60635 241 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 TADA2AO75478 443 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 GRIK3Q13003 919 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 NOTUMQ6P988 496 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 POTEHQ6S545 545 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 DHX32Q7L7V1 743 aaKnown RBP8.7□□□□□ -1.02
NXF1-215ENST00000533440 FERMT3Q86UX7 667 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
NXF1-215ENST00000533440 RNF149Q8NC42 400 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 ETNPPLQ8TBG4 499 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 DNASE1L2Q92874 299 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 TMEM143Q96AN5 459 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 CSRNP2Q9H175 543 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 NXF3Q9H4D5 531 aaKnown RBP8.7□□□□□ -1.02
NXF1-215ENST00000533440 HCFC1R1Q9NWW0 138 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 DNMT3BQ9UBC3 853 aaKnown RBP8.7□□□□□ -1.02
NXF1-215ENST00000533440 CEP295Q9C0D2 2601 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 WDFY3Q8IZQ1 3526 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 SF3B1O75533 1304 aaKnown RBP eCLIP8.7□□□□□ -1.021e-8■■■■■ 160.4
NXF1-215ENST00000533440 ZMYM2Q9UBW7 1377 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
NXF1-215ENST00000533440 CCDC196A0A1B0GTZ2 297 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 EML1O00423 815 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 MAN2B1O00754 1011 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 TM4SF5O14894 197 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 ADAM12O43184 909 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 FOXD2O60548 495 aaPredicted RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 ERLIN2O94905 339 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 RFC5P40937 340 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 QARSP47897 775 aaKnown RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 CCR3P51677 355 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 PTENP60484 403 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 POU5F1BQ06416 359 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 DMWDQ09019 674 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 COL9A2Q14055 689 aaPredicted RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 RAB33AQ14088 237 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 HSP90AA2PQ14568 343 aaPredicted RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 PPP2R5DQ14738 602 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 PSMD5Q16401 504 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 AMHR2Q16671 573 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 TSGA10IPQ3SY00 556 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 PABPC1LQ4VXU2 614 aaKnown RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 AXDND1Q5T1B0 1012 aaPredicted RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 TANGO2Q6ICL3 276 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 RTL10Q7L3V2 364 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 HACE1Q8IYU2 909 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 CCDC148Q8NFR7 591 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 SLC7A14Q8TBB6 771 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 TBCKQ8TEA7 893 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 RABGGTAQ92696 567 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 ELSPBP1Q96BH3 223 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 CPB2Q96IY4 423 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 CEP170P1Q96L14 293 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 PAAF1Q9BRP4 392 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 ESYT1Q9BSJ8 1104 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 TTPALQ9BTX7 342 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 APOL6Q9BWW8 343 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 AVENQ9NQS1 362 aaPredicted RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 GDE1Q9NZC3 331 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 WRAP73Q9P2S5 460 aaPredicted RBP8.69□□□□□ -1.02
NXF1-215ENST00000533440 POLIQ9UNA4 740 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 NID2Q14112 1375 aa8.69□□□□□ -1.02
NXF1-215ENST00000533440 HRO43593 1189 aa8.68□□□□□ -1.02
NXF1-215ENST00000533440 DKC1O60832 514 aaKnown RBP eCLIP8.68□□□□□ -1.02
NXF1-215ENST00000533440 TDP2O95551 362 aa8.68□□□□□ -1.02
NXF1-215ENST00000533440 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms