RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 ALG6Q9Y672 507 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 SLC4A1P02730 911 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 BRAFP15056 766 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 GPS1Q13098 491 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 CENPPQ6IPU0 288 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 ARHGEF18Q6ZSZ5 1173 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 CCDC80Q76M96 950 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 NSMCE1Q8WV22 266 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 TTC17Q96AE7 1141 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 ZCWPW1Q9H0M4 648 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 SNX25Q9H3E2 840 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 NOP53Q9NZM5 478 aaKnown RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 GOLGA4Q13439 2230 aaKnown RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 ESYT2A0FGR8 921 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 EDRF1Q3B7T1 1238 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 FBXL16Q8N461 479 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 SNRNP27Q8WVK2 155 aaKnown RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 BTBD6Q96KE9 485 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 NAGPAQ9UK23 515 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 TMEM150BA6NC51 233 aa13□□□□□ -0.33
BDNF-218ENST00000533246 ZBED1O96006 694 aa13□□□□□ -0.33
BDNF-218ENST00000533246 PLS3P13797 630 aa13□□□□□ -0.33
BDNF-218ENST00000533246 RASSF2P50749 326 aa13□□□□□ -0.33
BDNF-218ENST00000533246 HERVK_113P62684 666 aa13□□□□□ -0.33
BDNF-218ENST00000533246 ZNF483Q8TF39 744 aaPredicted RBP13□□□□□ -0.33
BDNF-218ENST00000533246 SCFD1Q8WVM8 642 aa13□□□□□ -0.33
BDNF-218ENST00000533246 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
BDNF-218ENST00000533246 CBWD1Q9BRT8 395 aa13□□□□□ -0.33
BDNF-218ENST00000533246 TARS2Q9BW92 718 aaKnown RBP13□□□□□ -0.33
BDNF-218ENST00000533246 PITPNM3Q9BZ71 974 aa13□□□□□ -0.33
BDNF-218ENST00000533246 DCTN4Q9UJW0 460 aa13□□□□□ -0.33
BDNF-218ENST00000533246 FIS1Q9Y3D6 152 aa13□□□□□ -0.33
BDNF-218ENST00000533246 JCADQ9P266 1359 aa13□□□□□ -0.33
BDNF-218ENST00000533246 MYO3BQ8WXR4 1341 aa13□□□□□ -0.33
BDNF-218ENST00000533246 CPP00450 1065 aa13□□□□□ -0.33
BDNF-218ENST00000533246 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
BDNF-218ENST00000533246 PSMC1P62191 440 aaKnown RBP13□□□□□ -0.33
BDNF-218ENST00000533246 CCNA1P78396 465 aa13□□□□□ -0.33
BDNF-218ENST00000533246 NAB2Q15742 525 aa13□□□□□ -0.33
BDNF-218ENST00000533246 ZC3H12AQ5D1E8 599 aaKnown RBP13□□□□□ -0.33
BDNF-218ENST00000533246 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
BDNF-218ENST00000533246 SPATA21Q7Z572 469 aa13□□□□□ -0.33
BDNF-218ENST00000533246 GBP7Q8N8V2 638 aaPredicted RBP13□□□□□ -0.33
BDNF-218ENST00000533246 ATP6V1G3Q96LB4 118 aa13□□□□□ -0.33
BDNF-218ENST00000533246 DUSP9Q99956 384 aaKnown RBP13□□□□□ -0.33
BDNF-218ENST00000533246 ACAD9Q9H845 621 aa13□□□□□ -0.33
BDNF-218ENST00000533246 SPC25Q9HBM1 224 aa13□□□□□ -0.33
BDNF-218ENST00000533246 TUFT1Q9NNX1 390 aa13□□□□□ -0.33
BDNF-218ENST00000533246 DBR1Q9UK59 544 aaKnown RBP13□□□□□ -0.33
BDNF-218ENST00000533246 BCL9O00512 1426 aa13□□□□□ -0.33
BDNF-218ENST00000533246 LRRIQ3A6PVS8 624 aaPredicted RBP13□□□□□ -0.33
BDNF-218ENST00000533246 H0Y3Z8 333 aa13□□□□□ -0.33
BDNF-218ENST00000533246 GOLGA8RI6L899 631 aa13□□□□□ -0.33
BDNF-218ENST00000533246 SPAG7O75391 227 aa13□□□□□ -0.33
BDNF-218ENST00000533246 ARPP19P56211 112 aa13□□□□□ -0.33
BDNF-218ENST00000533246 SOX10P56693 466 aa13□□□□□ -0.33
BDNF-218ENST00000533246 HDAC7Q8WUI4 952 aa13□□□□□ -0.33
BDNF-218ENST00000533246 FAM151AQ8WW52 585 aa13□□□□□ -0.33
BDNF-218ENST00000533246 IL17RAQ96F46 866 aa13□□□□□ -0.33
BDNF-218ENST00000533246 CFAP57Q96MR6 1250 aa13□□□□□ -0.33
BDNF-218ENST00000533246 ZIM3Q96PE6 472 aa13□□□□□ -0.33
BDNF-218ENST00000533246 TMEM117Q9H0C3 514 aa13□□□□□ -0.33
BDNF-218ENST00000533246 A0A0G2JND7 137 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 GMNCA6NCL1 334 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 H3BQF6 201 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 MEFVO15553 781 aaPredicted RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 COMTP21964 271 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 CDC25CP30307 473 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 STAT5BP51692 787 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 COG2Q14746 738 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 RAPH1Q70E73 1250 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 LRRC71Q8N4P6 559 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 SYT2Q8N9I0 419 aaPredicted RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 FAM81AQ8TBF8 368 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 MTMR8Q96EF0 704 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 THAP2Q9H0W7 228 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 OSGEPQ9NPF4 335 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 AGPAT3Q9NRZ7 376 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 HPCAL4Q9UM19 191 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 ENTPD3O75355 529 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 SFNP31947 248 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 IREB2P48200 963 aaKnown RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 GET4Q7L5D6 327 aaPredicted RBP12.99□□□□□ -0.33
BDNF-218ENST00000533246 PCGF5Q86SE9 256 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 CBWD2Q8IUF1 395 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 PHF20L1A8MW92 1017 aa12.99□□□□□ -0.33
BDNF-218ENST00000533246 TOM1L1O75674 476 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms