RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 TRIP11Q15643 1979 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 VWA3AA6NCI4 1184 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 CCDC169A6NNP5 214 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 RECQL4O94761 1208 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 EDN1P05305 212 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 THP07101 528 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 CREMQ03060 361 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 USP41Q3LFD5 358 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 NT5DC1Q5TFE4 455 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 EEF1DP3Q658K8 133 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 FUT10Q6P4F1 479 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 KCNK18Q7Z418 384 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 CDK5RAP3Q96JB5 506 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 RUSC1Q9BVN2 902 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 POMKQ9H5K3 350 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 POLD4Q9HCU8 107 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 KMT5AQ9NQR1 393 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 RAPGEFL1Q9UHV5 662 aa25.8■■□□□ 1.72
SMPD1-209ENST00000533196 HSP90AA2PQ14568 343 aaPredicted RBP25.79■■□□□ 1.72
SMPD1-209ENST00000533196 TAS1R1Q7RTX1 841 aa25.79■■□□□ 1.72
SMPD1-209ENST00000533196 SYT2Q8N9I0 419 aaPredicted RBP25.79■■□□□ 1.72
SMPD1-209ENST00000533196 PNMA5Q96PV4 448 aa25.79■■□□□ 1.72
SMPD1-209ENST00000533196 MYO10Q9HD67 2058 aa25.79■■□□□ 1.72
SMPD1-209ENST00000533196 C2CD2LO14523 706 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 PTGESO14684 152 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 TEX28O15482 410 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 TADA2AO75478 443 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 PDCP20941 246 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 ZXDAP98168 799 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 MAPK7Q13164 816 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 GPR149Q86SP6 731 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 C12orf76Q8N812 135 aaPredicted RBP25.78■■□□□ 1.72
SMPD1-209ENST00000533196 CMASQ8NFW8 434 aaPredicted RBP25.78■■□□□ 1.72
SMPD1-209ENST00000533196 HDAC7Q8WUI4 952 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 SPIRE2Q8WWL2 714 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 NTPCRQ9BSD7 190 aaKnown RBP25.78■■□□□ 1.72
SMPD1-209ENST00000533196 MRPL4Q9BYD3 311 aaKnown RBP25.78■■□□□ 1.72
SMPD1-209ENST00000533196 FNIP2Q9P278 1114 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 USTQ9Y2C2 406 aa25.78■■□□□ 1.72
SMPD1-209ENST00000533196 DENND4AQ7Z401 1863 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 SPDYE4A6NLX3 237 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 ZRSR1Q15695 479 aaKnown RBP25.77■■□□□ 1.72
SMPD1-209ENST00000533196 CYP26C1Q6V0L0 522 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 C15orf39Q6ZRI6 1047 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 BMP8AQ7Z5Y6 402 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 ACO2Q99798 780 aaKnown RBP25.77■■□□□ 1.72
SMPD1-209ENST00000533196 RHOBTB2Q9BYZ6 727 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 GPR62Q9BZJ7 368 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 USP20Q9Y2K6 914 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 SF3B1O75533 1304 aaKnown RBP eCLIP25.77■■□□□ 1.72
SMPD1-209ENST00000533196 PLXNA3P51805 1871 aa25.77■■□□□ 1.72
SMPD1-209ENST00000533196 F8W810 466 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 GLUD1P00367 558 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 SMTNP53814 917 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 ELAVL2Q12926 359 aaKnown RBP25.76■■□□□ 1.71
SMPD1-209ENST00000533196 NAB2Q15742 525 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 TMEM119Q4V9L6 283 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 TRIM67Q6ZTA4 783 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 PTPRHQ9HD43 1115 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 CITO14578 2027 aa25.76■■□□□ 1.71
SMPD1-209ENST00000533196 ZNF318Q5VUA4 2279 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 GRM5P41594 1212 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 SLC12A3P55017 1021 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 PTPN21Q16825 1174 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 TMC5Q6UXY8 1006 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 PLCD3Q8N3E9 789 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 CALML4Q96GE6 196 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 MFSD14AQ96MC6 490 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 CCDC94Q9BW85 323 aaPredicted RBP25.75■■□□□ 1.71
SMPD1-209ENST00000533196 TOPORSQ9NS56 1045 aaPredicted RBP25.75■■□□□ 1.71
SMPD1-209ENST00000533196 CDH22Q9UJ99 828 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 GDAQ9Y2T3 454 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 C2orf16Q68DN1 1984 aa25.75■■□□□ 1.71
SMPD1-209ENST00000533196 CASTOR2A6NHX0 329 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 PLA2G4BP0C869 781 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 PLS3P13797 630 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 LONP1P36776 959 aaKnown RBP25.74■■□□□ 1.71
SMPD1-209ENST00000533196 UBA7P41226 1012 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 YARSP54577 528 aaKnown RBP25.74■■□□□ 1.71
SMPD1-209ENST00000533196 SIGLEC14Q08ET2 396 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 TAS1R3Q7RTX0 852 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 ZDHHC14Q8IZN3 488 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 UROC1Q96N76 676 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 BACH2Q9BYV9 841 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 CDT1Q9H211 546 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 KCNH6Q9H252 994 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 PLEKHA4Q9H4M7 779 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 MAN1C1Q9NR34 630 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 TSHZ2Q9NRE2 1034 aa25.74■■□□□ 1.71
SMPD1-209ENST00000533196 C2CD4DB7Z1M9 353 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 H0YCG3 227 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 TMEM189-UBE2V1I3L0A0 370 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 PAPLNO95428 1278 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 BRD1O95696 1058 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 WEE2P0C1S8 567 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 MCF2P10911 925 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 SCP2P22307 547 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 PROZP22891 400 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 PLA2G5P39877 138 aa25.73■■□□□ 1.71
SMPD1-209ENST00000533196 STRN3Q13033 797 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms