RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 GRASPQ7Z6J2 395 aaPredicted RBP12.82□□□□□ -0.36
CMTM1-216ENST00000533078 CEP57Q86XR8 500 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 B3GALT6Q96L58 329 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 TTPALQ9BTX7 342 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 NFKBIZQ9BYH8 718 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 GPR62Q9BZJ7 368 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 FOXQ1Q9C009 403 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 RGL1Q9NZL6 768 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 FBXO4Q9UKT5 387 aa12.82□□□□□ -0.36
CMTM1-216ENST00000533078 EFEMP2O95967 443 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 C8AP07357 584 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 ARF4P18085 180 aaPredicted RBP12.81□□□□□ -0.36
CMTM1-216ENST00000533078 RPL17P18621 184 aaKnown RBP12.81□□□□□ -0.36
CMTM1-216ENST00000533078 HOXA9P31269 272 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 GPC5P78333 572 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 MBTD1Q05BQ5 628 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 STK3Q13188 491 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 TUSC3Q13454 348 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 SNW1Q13573 536 aaKnown RBP12.81□□□□□ -0.36
CMTM1-216ENST00000533078 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
CMTM1-216ENST00000533078 MLF2Q15773 248 aaPredicted RBP12.81□□□□□ -0.36
CMTM1-216ENST00000533078 PSMD5Q16401 504 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 FAM171A1Q5VUB5 890 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 LILRA6Q6PI73 481 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 PIK3AP1Q6ZUJ8 805 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
CMTM1-216ENST00000533078 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 OSBPL6Q9BZF3 934 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 ANKEF1Q9NU02 776 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 MIOSQ9NXC5 875 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 KLK14Q9P0G3 267 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
CMTM1-216ENST00000533078 FBXW11Q9UKB1 542 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 KCNJ14Q9UNX9 436 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 PCDHGA2Q9Y5H1 932 aa12.81□□□□□ -0.36
CMTM1-216ENST00000533078 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 FANCMQ8IYD8 2048 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 MED19A0JLT2 244 aaPredicted RBP12.8□□□□□ -0.36
CMTM1-216ENST00000533078 LRRIQ4A6NIV6 560 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 F8W810 466 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 THP07101 528 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 CAPSQ13938 189 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
CMTM1-216ENST00000533078 PRSS55Q6UWB4 352 aaPredicted RBP12.8□□□□□ -0.36
CMTM1-216ENST00000533078 PARM1Q6UWI2 310 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 PIK3R5Q8WYR1 880 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 WASF1Q92558 559 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 FGF13Q92913 245 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 FGF14Q92915 247 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 NELL2Q99435 816 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 ADPGKQ9BRR6 497 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 PHF20Q9BVI0 1012 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 PRMT7Q9NVM4 692 aaPredicted RBP12.8□□□□□ -0.36
CMTM1-216ENST00000533078 PCDHA12Q9UN75 941 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 MRPS17Q9Y2R5 130 aaKnown RBP12.8□□□□□ -0.36
CMTM1-216ENST00000533078 ARID2Q68CP9 1835 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
CMTM1-216ENST00000533078 CASTOR2A6NHX0 329 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 FAM170BA6NMN3 283 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 CCL16O15467 120 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 SLITRK3O94933 977 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 CSTF1Q05048 431 aaKnown RBP12.79□□□□□ -0.36
CMTM1-216ENST00000533078 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
CMTM1-216ENST00000533078 PPP2R5DQ14738 602 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 NPY5RQ15761 445 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 RSPO4Q2I0M5 234 aaPredicted RBP12.79□□□□□ -0.36
CMTM1-216ENST00000533078 UVSSAQ2YD98 709 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 SLC44A4Q53GD3 710 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 ZBTB41Q5SVQ8 909 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 RTL10Q7L3V2 364 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 HASPINQ8TF76 798 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 HAS1Q92839 578 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 AIFM3Q96NN9 605 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 EIF2AK1Q9BQI3 630 aaKnown RBP12.79□□□□□ -0.36
CMTM1-216ENST00000533078 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
CMTM1-216ENST00000533078 C2orf40Q9H1Z8 148 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 XPNPEP1Q9NQW7 623 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 DLL3Q9NYJ7 618 aa12.79□□□□□ -0.36
CMTM1-216ENST00000533078 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
CMTM1-216ENST00000533078 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 PRR5-ARHGAP8B1AHC4 643 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 N4BP3O15049 544 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 LYPLA2O95372 231 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 POU2F2P09086 479 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 GLULP15104 373 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 ARL2P36404 184 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 ARHGAP8P85298 464 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 CALCRLQ16602 461 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 AMHR2Q16671 573 aa12.78□□□□□ -0.36
CMTM1-216ENST00000533078 PABPC1LQ4VXU2 614 aaKnown RBP12.78□□□□□ -0.36
CMTM1-216ENST00000533078 AXDND1Q5T1B0 1012 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-216ENST00000533078 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-216ENST00000533078 CDR2LQ86X02 465 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms