RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 ZBTB44Q8NCP5 570 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 KXD1Q9BQD3 176 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 CLSTN3Q9BQT9 956 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 LTB4R2Q9NPC1 389 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 RGL1Q9NZL6 768 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 KLK14Q9P0G3 267 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 FBXW11Q9UKB1 542 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 VAV3Q9UKW4 847 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 CDV3Q9UKY7 258 aaKnown RBP16.07■□□□□ 0.16
CDC27-209ENST00000532893 SMG5Q9UPR3 1016 aaKnown RBP16.07■□□□□ 0.16
CDC27-209ENST00000532893 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 COL4A3Q01955 1670 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 CACNA1GO43497 2377 aa16.07■□□□□ 0.16
CDC27-209ENST00000532893 PRR5-ARHGAP8B1AHC4 643 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 M0R2N6 131 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 HNRNPA1P09651 372 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDC27-209ENST00000532893 ARF4P18085 180 aaPredicted RBP16.06■□□□□ 0.16
CDC27-209ENST00000532893 PDIA3P30101 505 aaKnown RBP16.06■□□□□ 0.16
CDC27-209ENST00000532893 ARHGAP8P85298 464 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 PFKPQ01813 784 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 PCBP1Q15365 356 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDC27-209ENST00000532893 LIN9Q5TKA1 542 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 TSSK4Q6SA08 328 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 CDR2LQ86X02 465 aaPredicted RBP16.06■□□□□ 0.16
CDC27-209ENST00000532893 CEP57Q86XR8 500 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 C4orf19Q8IY42 314 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 HACE1Q8IYU2 909 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 HASPINQ8TF76 798 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 FAM20AQ96MK3 541 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 PAAF1Q9BRP4 392 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 LXNQ9BS40 222 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 PARP2Q9UGN5 583 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 USP18Q9UMW8 372 aa16.06■□□□□ 0.16
CDC27-209ENST00000532893 SF3B1O75533 1304 aaKnown RBP eCLIP16.05■□□□□ 0.166e-6■■■■■ 80.1
CDC27-209ENST00000532893 LILRB5O75023 590 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 XYLBO75191 536 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 NPTXRO95502 500 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 C8AP07357 584 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 MAGEA9P43362 315 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 LMNB2Q03252 620 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 SSRP1Q08945 709 aaKnown RBP16.05■□□□□ 0.16
CDC27-209ENST00000532893 GRIK3Q13003 919 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 HSP90AA2PQ14568 343 aaPredicted RBP16.05■□□□□ 0.16
CDC27-209ENST00000532893 MXD4Q14582 209 aaPredicted RBP16.05■□□□□ 0.16
CDC27-209ENST00000532893 EPHA7Q15375 998 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 AMHR2Q16671 573 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 RSPO2Q6UXX9 243 aaPredicted RBP16.05■□□□□ 0.16
CDC27-209ENST00000532893 TRIM22Q8IYM9 498 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 CLDN23Q96B33 292 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 DYDC2Q96IM9 177 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 MTRQ99707 1265 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 TTPALQ9BTX7 342 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 PHF20Q9BVI0 1012 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 EPC1Q9H2F5 836 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 KCNMB3Q9NPA1 279 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 XPNPEP1Q9NQW7 623 aa16.05■□□□□ 0.16
CDC27-209ENST00000532893 MIA3Q5JRA6 1907 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 ADAM12O43184 909 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 B4GALT5O43286 388 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 TGM1P22735 817 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 TARSP26639 723 aaKnown RBP16.04■□□□□ 0.16
CDC27-209ENST00000532893 MBTD1Q05BQ5 628 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 TFDP1Q14186 410 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 CTTNQ14247 550 aaKnown RBP16.04■□□□□ 0.16
CDC27-209ENST00000532893 NPY5RQ15761 445 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 PSMD5Q16401 504 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 BMP2KLQ5H9B9 411 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 TPRG1Q6ZUI0 275 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 SKAP1Q86WV1 359 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
CDC27-209ENST00000532893 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 PIK3R5Q8WYR1 880 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 NELL1Q92832 810 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 KCNB2Q92953 911 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 NELL2Q99435 816 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 RTKNQ9BST9 563 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 HCFC1R1Q9NWW0 138 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 SNX14Q9Y5W7 946 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 MYH15Q9Y2K3 1946 aa16.04■□□□□ 0.16
CDC27-209ENST00000532893 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 NCAM2O15394 837 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 MARCH6O60337 910 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 TBC1D4O60343 1298 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 HOXA9P31269 272 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 CYP4A11Q02928 519 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 POU5F1BQ06416 359 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 NCAPH2Q6IBW4 605 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 SLC27A1Q6PCB7 646 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 KRT25Q7Z3Z0 450 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
CDC27-209ENST00000532893 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 NPAS3Q8IXF0 933 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 DAGLBQ8NCG7 672 aa16.03■□□□□ 0.16
CDC27-209ENST00000532893 SLC7A14Q8TBB6 771 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms