RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 WDR75Q8IWA0 830 aaKnown RBP15.68■□□□□ 0.1
PCDHA9-202ENST00000532602 ANKRD13AQ8IZ07 590 aa15.68■□□□□ 0.1
PCDHA9-202ENST00000532602 ANO9A1A5B4 782 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 COPEO14579 308 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 NSUN2Q08J23 767 aaKnown RBP eCLIP15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 TTC8Q8TAM2 541 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 TXLNGQ9NUQ3 528 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 USP32Q8NFA0 1604 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 EMC2Q15006 297 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 KLHL38Q2WGJ6 581 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 FAM102AQ5T9C2 384 aaPredicted RBP15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 AGBL3Q8NEM8 1001 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 TJP2Q9UDY2 1190 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 AGAP1Q9UPQ3 857 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 TMEM131LA2VDJ0 1609 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 PFASO15067 1338 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 PGK2P07205 417 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 MX2P20592 715 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 EFCAB12Q6NXP0 572 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 AKT1S1Q96B36 256 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 TRIM54Q9BYV2 358 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 HACD3Q9P035 362 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 LSM7Q9UK45 103 aaKnown RBP15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 ESRRBO95718 433 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 FOXD4Q12950 439 aaPredicted RBP15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 KIF2CQ99661 725 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 TBX3O15119 743 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 SLC26A4O43511 780 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 PDGFRBP09619 1106 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 EPHX2P34913 555 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 PTK2BQ14289 1009 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 CRLF3Q8IUI8 442 aa15.67■□□□□ 0.1
PCDHA9-202ENST00000532602 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 HSD17B4P51659 736 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 MXRA8Q9BRK3 442 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 NFU1Q9UMS0 254 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 ASAP2O43150 1006 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 ALDH1A1P00352 501 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 ZNF235Q14590 738 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 TMCO4Q5TGY1 634 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 KIFC3Q9BVG8 833 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 THEGQ9P2T0 379 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 E5RI56 91 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 DNAJC8O75937 253 aaPredicted RBP15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 NCF2P19878 526 aaPredicted RBP15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 RGS7P49802 495 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 NOP14P78316 857 aaKnown RBP15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 SREBF2Q12772 1141 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 SYCP2LQ5T4T6 812 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 KDELC2Q7Z4H8 507 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 SPATA2LQ8IUW3 424 aaPredicted RBP15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 RHOT1Q8IXI2 618 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 UBE2Q2Q8WVN8 375 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 TRIM45Q9H8W5 580 aaPredicted RBP15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 PPP1R9AQ9ULJ8 1098 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 DFFAO00273 331 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 PDXKO00764 312 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 LUC7L3O95232 432 aaKnown RBP15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 ADGRA1Q86SQ6 560 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 CNPY4Q8N129 248 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 TMEM60Q9H2L4 133 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 FGFR1OP2Q9NVK5 253 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 DDNO94850 711 aaPredicted RBP15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 HMBSP08397 361 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 PRAMEP78395 509 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 RBP5P82980 135 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 SARM1Q6SZW1 724 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 TRIM15Q9C019 465 aa15.66■□□□□ 0.1
PCDHA9-202ENST00000532602 TADA2AO75478 443 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 ANGPTL8Q6UXH0 198 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 SLC30A5Q8TAD4 765 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 EPAS1Q99814 870 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 NNTQ13423 1086 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 NBPF12Q5TAG4 269 aaPredicted RBP15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 FRMD5Q7Z6J6 570 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 CDR2LQ86X02 465 aaPredicted RBP15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 GSPT2Q8IYD1 628 aaKnown RBP15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 MTFR1LQ9H019 292 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 KCND2Q9NZV8 630 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 NOVA2Q9UNW9 492 aaKnown RBP15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 SPECC1L-ADORA2AF8WAN1 911 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 WDR72Q3MJ13 1102 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 CPA5Q8WXQ8 436 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 UNC45AQ9H3U1 944 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 MYMKA6NI61 221 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 MAFGO15525 162 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 DHX35Q9H5Z1 703 aaKnown RBP15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 KCNQ5Q9NR82 932 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 SNX24Q9Y343 169 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 SNX9Q9Y5X1 595 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 RFC5P40937 340 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 XRRA1Q6P2D8 792 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 NFRKBQ6P4R8 1299 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 RAB42Q8N4Z0 105 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 KLHL29Q96CT2 875 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 NUDT12Q9BQG2 462 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 MOV10L1Q9BXT6 1211 aaKnown RBP15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 PARD6BQ9BYG5 372 aa15.65■□□□□ 0.1
PCDHA9-202ENST00000532602 KCNH7Q9NS40 1196 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms