RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RRP1BQ14684 758 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM153CQ494X1 144 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 CNNM4Q6P4Q7 775 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 DGKHQ86XP1 1220 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 ELOA2Q8IYF1 753 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 UBL4BQ8N7F7 174 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 LENG1Q96BZ8 264 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 NT5C3AQ9H0P0 336 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 RXFP1Q9HBX9 757 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 RNF146Q9NTX7 359 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 CYP39A1Q9NYL5 469 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM153AQ9UHL3 310 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 LZTS1Q9Y250 596 aa7.23□□□□□ -1.25
TGFBR3-209ENST00000532540 HAUS5O94927 633 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 OSBPP22059 807 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 STAT3P40763 770 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 NEK2P51955 445 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 MRRFQ96E11 262 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 SLITRK6Q9H5Y7 841 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 TACC3Q9Y6A5 838 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 TNPO2O14787 897 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 ZSCAN9O15535 394 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 KRT75O95678 551 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 KRT16P08779 473 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 ALOX15P16050 662 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 DR1Q01658 176 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 DMPKQ09013 629 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 SNAPC2Q13487 334 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 ALX1Q15699 326 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 GALNT17Q6IS24 598 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 LDHDQ86WU2 507 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 DDX42Q86XP3 938 aaKnown RBP eCLIP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 RAB34Q9BZG1 259 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 LRRC27Q9C0I9 530 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 XAB2Q9HCS7 855 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 CIDEBQ9UHD4 219 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 PRR12Q9ULL5 1215 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 GAKO14976 1311 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 FAM170AA1A519 330 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 NOP56O00567 594 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 FANCGO15287 622 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 FOXP2O15409 715 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 CCDC22O60826 627 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 H2AFZP0C0S5 128 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 CASP1P29466 404 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 PTDSS1P48651 473 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 NCALDP61601 193 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF844Q08AG5 666 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 DEFB115Q30KQ5 88 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 GPATCH4Q5T3I0 446 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 C6orf89Q6UWU4 347 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 C15orf52Q6ZUT6 534 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 H2AFVQ71UI9 128 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 MREGQ8N565 214 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 PPP1R14BQ96C90 147 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 P2RX7Q99572 595 aaKnown RBP7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 NDST4Q9H3R1 872 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 DNAJC18Q9H819 358 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 DKK3Q9UBP4 350 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF180Q9UJW8 692 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 SNX24Q9Y343 169 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 THSD7AQ9UPZ6 1657 aa7.22□□□□□ -1.25
TGFBR3-209ENST00000532540 KRT38O76015 456 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 POLR2MP0CAP2 368 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 PTPRAP18433 802 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 RGS2P41220 211 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 ARPC4P59998 168 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 ADAM9Q13443 819 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 PDIA5Q14554 519 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 MMEL1Q495T6 779 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 TRIM67Q6ZTA4 783 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 ERO1BQ86YB8 467 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF579Q8NAF0 562 aaKnown RBP7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 ZNF784Q8NCA9 323 aaPredicted RBP7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 SCG3Q8WXD2 468 aaKnown RBP7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 CTNNAL1Q9UBT7 734 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 TBK1Q9UHD2 729 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 AMACRQ9UHK6 382 aa7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.21□□□□□ -1.25
TGFBR3-209ENST00000532540 ZSCAN5CA6NGD5 496 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 KIF28PB7ZC32 967 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 STRNO43815 780 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 CAPN15O75808 1086 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 TARSP26639 723 aaKnown RBP7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 TNFRSF8P28908 595 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 TECP42680 631 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 BACE1P56817 501 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 HERVK_113P62684 666 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 BAATQ14032 418 aaPredicted RBP7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 SPARCL1Q14515 664 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 COG2Q14746 738 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 KIF22Q14807 665 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 SGSM1Q2NKQ1 1148 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 SBK1Q52WX2 424 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 ERMARDQ5T6L9 678 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 ANO5Q75V66 913 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 PATL1Q86TB9 770 aaKnown RBP7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM50Q86XT4 487 aa7.21□□□□□ -1.26
TGFBR3-209ENST00000532540 CREG2Q8IUH2 290 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms