RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 BASP1P80723 227 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 KCNB1Q14721 858 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 MOXD1Q6UVY6 613 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 FRMD5Q7Z6J6 570 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 VSTM4Q8IW00 320 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 HPDLQ96IR7 371 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 PFDN4Q9NQP4 134 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 DPP3Q9NY33 737 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 DDX41Q9UJV9 622 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 LSM7Q9UK45 103 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 CXCR5P32302 372 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 NAMPTP43490 491 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 PKN1Q16512 942 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 FAM110CQ1W6H9 321 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 EFCAB13Q8IY85 973 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 IGFLR1Q9H665 355 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 UBQLN1Q9UMX0 589 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 UBA1P22314 1058 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ALDH3A1P30838 453 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 NPTX2P47972 431 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ZNF280AP59817 542 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 TTC30BQ8N4P2 665 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 UHMK1Q8TAS1 419 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 PI4K2AQ9BTU6 479 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 NSRP1Q9H0G5 558 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ABCF3Q9NUQ8 709 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 IRAK4Q9NWZ3 460 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 FARP1Q9Y4F1 1045 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 HEY1Q9Y5J3 304 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 SALL3Q9BXA9 1300 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 LRP6O75581 1613 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ZNF142P52746 1687 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 HMGCRP04035 888 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ATP5DP30049 168 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 GNL1P36915 607 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 CDK17Q00537 523 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 GRB10Q13322 594 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 TRIP13Q15645 432 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 TAF2Q6P1X5 1199 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ZDHHC9Q9Y397 364 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 CICQ96RK0 1608 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ZBED1O96006 694 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 HLA-DRAP01903 254 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 RPLP2P05387 115 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ODC1P11926 461 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 TCP1P17987 556 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ZNF449Q6P9G9 518 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 SH3BP1Q9Y3L3 701 aa8.49□□□□□ -1.05
CTNND1-230ENST00000532245 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
CTNND1-230ENST00000532245 SLC26A4O43511 780 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 CABYRO75952 493 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 THP07101 528 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 ENOSF1Q7L5Y1 443 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 TADA2BQ86TJ2 420 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 NDUFAF2Q8N183 169 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 TTC25Q96NG3 672 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 CYTH3O43739 400 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 ALDH2P05091 517 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 AKAP5P24588 427 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 PSMC6P62333 389 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 DPYDQ12882 1025 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 MPZL3Q6UWV2 235 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 RUFY4Q6ZNE9 571 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 GAS2L3Q86XJ1 694 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 C4orf19Q8IY42 314 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 TMEM199Q8N511 208 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 C17orf75Q9HAS0 396 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 DONSONQ9NYP3 566 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 PEAK1Q9H792 1746 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 F5H423 210 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-230ENST00000532245 SLC16A3O15427 465 aaKnown RBP8.48□□□□□ -1.05
CTNND1-230ENST00000532245 IKBKEQ14164 716 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 SNX17Q15036 470 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 CELF3Q5SZQ8 465 aaKnown RBP8.48□□□□□ -1.05
CTNND1-230ENST00000532245 TATDN1Q6P1N9 297 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 STKLD1Q8NE28 680 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 BHMTQ93088 406 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 SCYL1Q96KG9 808 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 NT5C1AQ9BXI3 368 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 DHX35Q9H5Z1 703 aaKnown RBP8.48□□□□□ -1.05
CTNND1-230ENST00000532245 SUDS3Q9H7L9 328 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-230ENST00000532245 PASKQ96RG2 1323 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 GOLGA8CPA6NN73 597 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 NDUFA10O95299 355 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 GFPT1Q06210 699 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-230ENST00000532245 FMR1Q06787 632 aaKnown RBP eCLIP8.48□□□□□ -1.051e-6■■■■□ 23.3
CTNND1-230ENST00000532245 CTXN3Q4LDR2 81 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 ARHGAP15Q53QZ3 475 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 NECAB2Q7Z6G3 386 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 SLC35F6Q8N357 371 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 HEMGNQ9BXL5 484 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 SNTG2Q9NY99 539 aa8.48□□□□□ -1.05
CTNND1-230ENST00000532245 NFKBIAP25963 317 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 PHBP35232 272 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 SULT1E1P49888 294 aa8.47□□□□□ -1.05
CTNND1-230ENST00000532245 NOP14P78316 857 aaKnown RBP8.47□□□□□ -1.05
CTNND1-230ENST00000532245 ADCY1Q08828 1119 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms