RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 FBXL18Q96ME1 805 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 MKNK1Q9BUB5 465 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 VPS16Q9H269 839 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 RBAKQ9NYW8 714 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-205ENST00000531303 PRKAG2Q9UGJ0 569 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 FAM189A1O60320 539 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 MKI67P46013 3256 aaKnown RBP20.72■□□□□ 0.91
SMPD1-205ENST00000531303 CYP24A1Q07973 514 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 DSC3Q14574 896 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 PLEKHG4Q58EX7 1191 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 TCERG1LQ5VWI1 586 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 TUBGCP2Q9BSJ2 902 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 HTATIP2Q9BUP3 242 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 NXF3Q9H4D5 531 aaKnown RBP20.72■□□□□ 0.91
SMPD1-205ENST00000531303 SNTG2Q9NY99 539 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 LIMA1Q9UHB6 759 aaKnown RBP20.72■□□□□ 0.91
SMPD1-205ENST00000531303 PCDHB2Q9Y5E7 798 aa20.72■□□□□ 0.91
SMPD1-205ENST00000531303 TRIP11Q15643 1979 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 AP5Z1O43299 807 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 TCTN1Q2MV58 587 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 BORCS6Q96GS4 357 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 CCDC94Q9BW85 323 aaPredicted RBP20.71■□□□□ 0.91
SMPD1-205ENST00000531303 MMRN2Q9H8L6 949 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 RPF1Q9H9Y2 349 aaKnown RBP20.71■□□□□ 0.91
SMPD1-205ENST00000531303 METTL14Q9HCE5 456 aaKnown RBP20.71■□□□□ 0.91
SMPD1-205ENST00000531303 FAM105AQ9NUU6 356 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 CPSF3Q9UKF6 684 aaKnown RBP20.71■□□□□ 0.91
SMPD1-205ENST00000531303 IPPQ9Y573 584 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 CITO14578 2027 aa20.71■□□□□ 0.91
SMPD1-205ENST00000531303 EVI5O60447 810 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 PARNO95453 639 aaKnown RBP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 CLTAP09496 248 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 TRIM49P0CI25 452 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 TRIM49CP0CI26 452 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 CXCL8P10145 99 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 DLATP10515 647 aaKnown RBP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 CSF2RAP15509 400 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 AKAP5P24588 427 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 VAMP7P51809 220 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 COPB1P53618 953 aaKnown RBP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 ENOX2Q16206 610 aaKnown RBP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 INTS8Q75QN2 995 aaKnown RBP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 RTN4RL1Q86UN2 441 aaPredicted RBP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 RNF169Q8NCN4 708 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 PLEKHO2Q8TD55 490 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 DPF3Q92784 378 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 MFSD14AQ96MC6 490 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 ACAP3Q96P50 834 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 POP1Q99575 1024 aaKnown RBP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 RNF39Q9H2S5 420 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 PDE11AQ9HCR9 933 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 IFNKQ9P0W0 207 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 PARP2Q9UGN5 583 aa20.7■□□□□ 0.9
SMPD1-205ENST00000531303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.7■□□□□ 0.9
SMPD1-205ENST00000531303 MAPK13O15264 365 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 CXCL10P02778 98 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 TPM2P07951 284 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 GRM5P41594 1212 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 MRE11P49959 708 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 MARSP56192 900 aaKnown RBP20.69■□□□□ 0.9
SMPD1-205ENST00000531303 WNT7BP56706 349 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 DLG4P78352 724 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 BFSP1Q12934 665 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 HSP90AA2PQ14568 343 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-205ENST00000531303 TRIM59Q8IWR1 403 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 SMG8Q8ND04 991 aaKnown RBP20.69■□□□□ 0.9
SMPD1-205ENST00000531303 NAP1L5Q96NT1 182 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-205ENST00000531303 TRIM5Q9C035 493 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 KLK14Q9P0G3 267 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 SYN1P17600 705 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 UBASH3AP57075 661 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 MAN2A1Q16706 1144 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 KYAT1Q16773 422 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 LMBRD2Q68DH5 695 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-205ENST00000531303 MFSD5Q6N075 450 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 APTXQ7Z2E3 356 aaKnown RBP20.69■□□□□ 0.9
SMPD1-205ENST00000531303 BRSK2Q8IWQ3 736 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 TMEM199Q8N511 208 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 LINC01599Q8WXQ3 324 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 LPPQ93052 612 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 FAM84AQ96KN4 292 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 FTHL17Q9BXU8 183 aa20.69■□□□□ 0.9
SMPD1-205ENST00000531303 ZMYND8Q9ULU4 1186 aaPredicted RBP20.69■□□□□ 0.9
SMPD1-205ENST00000531303 ANK1P16157 1881 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 RECQL4O94761 1208 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 RFC2P35250 354 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 PSMD6Q15008 389 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 PTPN21Q16825 1174 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 FILIP1LQ4L180 1135 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 VWA3BQ502W6 1294 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 FNBP1Q96RU3 617 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 XPO4Q9C0E2 1151 aaKnown RBP20.68■□□□□ 0.9
SMPD1-205ENST00000531303 RGS18Q9NS28 235 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 TOPORSQ9NS56 1045 aaPredicted RBP20.68■□□□□ 0.9
SMPD1-205ENST00000531303 RNF19AQ9NV58 838 aa20.68■□□□□ 0.9
SMPD1-205ENST00000531303 MEIS3P2A8K0S8 358 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 LACTBL1A8MY62 500 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 MEFVO15553 781 aaPredicted RBP20.67■□□□□ 0.9
SMPD1-205ENST00000531303 ACRP10323 421 aa20.67■□□□□ 0.9
SMPD1-205ENST00000531303 ITGA4P13612 1032 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms