RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SNAP23O00161 211 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 TEX33O43247 280 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 ATP1A1P05023 1023 aaKnown RBP8.97□□□□□ -0.97
CTNND1-227ENST00000530748 RFC5P40937 340 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 SNX17Q15036 470 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 NOP53Q9NZM5 478 aaKnown RBP8.97□□□□□ -0.97
CTNND1-227ENST00000530748 DAGLAQ9Y4D2 1042 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 PIK3R2O00459 728 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 CYP26A1O43174 497 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 ZBTB7AO95365 584 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 MOCS2O96007 188 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-227ENST00000530748 TRIM49P0CI25 452 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 TRIM49CP0CI26 452 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 DDX5P17844 614 aaKnown RBP8.97□□□□□ -0.97
CTNND1-227ENST00000530748 STAT5BP51692 787 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 SNRPFP62306 86 aaKnown RBP8.97□□□□□ -0.97
CTNND1-227ENST00000530748 KCNA1Q09470 495 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 GRAMD1BQ3KR37 738 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 PGBD4Q96DM1 585 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 ATP6V1G3Q96LB4 118 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 CYTH2Q99418 400 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 EGFL8Q99944 293 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 MTMR4Q9NYA4 1195 aa8.97□□□□□ -0.97
CTNND1-227ENST00000530748 IL18RAPO95256 599 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ATXN8OSP0DMR3 200 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 NMT1P30419 496 aaKnown RBP8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ARSEP51690 589 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 CDH6P55285 790 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 TPI1P60174 286 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ZNF543Q08ER8 600 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 NCAPHQ15003 741 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 MAPRE2Q15555 327 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 NLRP14Q86W24 1093 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 MICALL2Q8IY33 904 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ASAP3Q8TDY4 903 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 C1orf54Q8WWF1 131 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 PIDD1Q9HB75 910 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 APEX2Q9UBZ4 518 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 PIN4Q9Y237 131 aaKnown RBP8.96□□□□□ -0.97
CTNND1-227ENST00000530748 GMNCA6NCL1 334 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 NEMP1O14524 444 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 FOXN1O15353 648 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 PHF2O75151 1096 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 TXNP10599 105 aaKnown RBP8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ARFIP2P53365 341 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 HMGCS2P54868 508 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 EIF3EP60228 445 aaKnown RBP8.96□□□□□ -0.97
CTNND1-227ENST00000530748 AP2B1P63010 937 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 POU5F1BQ06416 359 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 PDCLQ13371 301 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ZNF235Q14590 738 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 LBRQ14739 615 aaKnown RBP8.96□□□□□ -0.97
CTNND1-227ENST00000530748 CCDC144BQ3MJ40 725 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ACCSLQ4AC99 568 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 CEP55Q53EZ4 464 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 C1orf146Q5VVC0 180 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 HIBCHQ6NVY1 386 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-227ENST00000530748 PBXIP1Q96AQ6 731 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 SENP7Q9BQF6 1050 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 SMYD3Q9H7B4 428 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 POLD4Q9HCU8 107 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 NYAP2Q9P242 653 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 HDAC6Q9UBN7 1215 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 ZNRF3Q9ULT6 936 aa8.96□□□□□ -0.97
CTNND1-227ENST00000530748 STXBP3O00186 592 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 GH1P01241 217 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 DCAF4L1Q3SXM0 396 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 SZRD1Q7Z422 152 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 LCA5Q86VQ0 697 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 METTL16Q86W50 562 aaKnown RBP8.96□□□□□ -0.98
CTNND1-227ENST00000530748 NUDCD3Q8IVD9 361 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 RAB42Q8N4Z0 105 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 TRIML2Q8N7C3 387 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 RNF149Q8NC42 400 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 ASIC4Q96FT7 647 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 STK33Q9BYT3 514 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 SMARCAD1Q9H4L7 1026 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 EIF3DO15371 548 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTNND1-227ENST00000530748 PRPF4O43172 522 aaKnown RBP eCLIP8.96□□□□□ -0.984e-8■□□□□ 10.4
CTNND1-227ENST00000530748 ENTPD3O75355 529 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 E2F6O75461 281 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 HSPA9P38646 679 aaKnown RBP8.96□□□□□ -0.98
CTNND1-227ENST00000530748 PEX19P40855 299 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 PRAMEP78395 509 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 TMEM132DQ14C87 1099 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 STOX1Q6ZVD7 989 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 RPAINQ86UA6 219 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 GLYCTKQ8IVS8 523 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 ZNF34Q8IZ26 560 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 ZNF668Q96K58 619 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-227ENST00000530748 EPAS1Q99814 870 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 ZNF70Q9UC06 446 aaPredicted RBP8.96□□□□□ -0.98
CTNND1-227ENST00000530748 C1orf167Q5SNV9 1468 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 FRMPD1Q5SYB0 1578 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 PTPRUQ92729 1446 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
CTNND1-227ENST00000530748 RBP5P82980 135 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms