RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 C1orf53Q5VUE5 145 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 SLFN12LQ6IEE8 588 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 SLC27A1Q6PCB7 646 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 CRELD2Q6UXH1 353 aaPredicted RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 FILIP1Q7Z7B0 1213 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 SLC9A9Q8IVB4 645 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 C12orf56Q8IXR9 622 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 NAP1L5Q96NT1 182 aaPredicted RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 POP1Q99575 1024 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 ADPGKQ9BRR6 497 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 TRIM5Q9C035 493 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 XPO4Q9C0E2 1151 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 RBAKQ9NYW8 714 aaPredicted RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 CGNQ9P2M7 1197 aaKnown RBP11.6□□□□□ -0.55
SOX6-213ENST00000530378 STYXL1Q9Y6J8 313 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 RALGAPA2Q2PPJ7 1873 aa11.6□□□□□ -0.55
SOX6-213ENST00000530378 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 GPR182O15218 404 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 OGTO15294 1046 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 SLC16A3O15427 465 aaKnown RBP11.59□□□□□ -0.55
SOX6-213ENST00000530378 STAG3L1P0CL83 205 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 AKAP5P24588 427 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 EEF1GP26641 437 aaKnown RBP11.59□□□□□ -0.55
SOX6-213ENST00000530378 MRE11P49959 708 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 SNRPFP62306 86 aaKnown RBP11.59□□□□□ -0.55
SOX6-213ENST00000530378 RBL2Q08999 1139 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 NFIL3Q16649 462 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 UBXN11Q5T124 520 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 APTXQ7Z2E3 356 aaKnown RBP11.59□□□□□ -0.55
SOX6-213ENST00000530378 ANKRD20A12PQ8NF67 263 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 LPPQ93052 612 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 ADAM2Q99965 735 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 TUBGCP2Q9BSJ2 902 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 CXCL16Q9H2A7 254 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 PDE11AQ9HCR9 933 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.55
SOX6-213ENST00000530378 SNTG2Q9NY99 539 aa11.59□□□□□ -0.55
SOX6-213ENST00000530378 PDCD11Q14690 1871 aaKnown RBP11.59□□□□□ -0.55
SOX6-213ENST00000530378 MEIS3P2A8K0S8 358 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 MCF2P10911 925 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 SYN1P17600 705 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 CYP24A1Q07973 514 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 ENOX2Q16206 610 aaKnown RBP11.58□□□□□ -0.56
SOX6-213ENST00000530378 FOXR2Q6PJQ5 311 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 ZNF710Q8N1W2 664 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 LINC01599Q8WXQ3 324 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 INTS13Q9NVM9 706 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 KLK14Q9P0G3 267 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 LIMA1Q9UHB6 759 aaKnown RBP11.58□□□□□ -0.56
SOX6-213ENST00000530378 PTPRJQ12913 1337 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 LTBP2Q14767 1821 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 ZNF233A6NK53 670 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 MEFVO15553 781 aaPredicted RBP11.58□□□□□ -0.56
SOX6-213ENST00000530378 TEX33O43247 280 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 ADCY5O95622 1261 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 GNA14O95837 355 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 KRT13P13646 458 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 RAG1P15918 1043 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 ZSCAN20P17040 1043 aaPredicted RBP11.58□□□□□ -0.56
SOX6-213ENST00000530378 UBASH3AP57075 661 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 BFSP1Q12934 665 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 UVSSAQ2YD98 709 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 DCAF4L1Q3SXM0 396 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 MIIPQ5JXC2 388 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 GLRA4Q5JXX5 417 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 FRMD5Q7Z6J6 570 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 TRIM59Q8IWR1 403 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 SMG8Q8ND04 991 aaKnown RBP11.58□□□□□ -0.56
SOX6-213ENST00000530378 DBF4BQ8NFT6 615 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 ELMO3Q96BJ8 720 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 BORCS6Q96GS4 357 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 FBXL18Q96ME1 805 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 PARP2Q9UGN5 583 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 CPSF3Q9UKF6 684 aaKnown RBP11.58□□□□□ -0.56
SOX6-213ENST00000530378 ZMYND8Q9ULU4 1186 aaPredicted RBP11.58□□□□□ -0.56
SOX6-213ENST00000530378 IPPQ9Y573 584 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 PCDHB2Q9Y5E7 798 aa11.58□□□□□ -0.56
SOX6-213ENST00000530378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.58□□□□□ -0.56
SOX6-213ENST00000530378 LRRIQ3A6PVS8 624 aaPredicted RBP11.57□□□□□ -0.56
SOX6-213ENST00000530378 RECQL4O94761 1208 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 ACRP10323 421 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 CSF2RAP15509 400 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 AXLP30530 894 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 GCLMP48507 274 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 VAMP7P51809 220 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 PCBP1Q15365 356 aaKnown RBP eCLIP11.57□□□□□ -0.56
SOX6-213ENST00000530378 MAN2A1Q16706 1144 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 SLC35C1Q96A29 364 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 MKNK1Q9BUB5 465 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 RPF1Q9H9Y2 349 aaKnown RBP11.57□□□□□ -0.56
SOX6-213ENST00000530378 FAM105AQ9NUU6 356 aa11.57□□□□□ -0.56
SOX6-213ENST00000530378 TDRD15B5MCY1 1934 aaKnown RBP11.56□□□□□ -0.56
SOX6-213ENST00000530378 CLSTN1O94985 981 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 KLK7P49862 253 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 ZNF75DP51815 510 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 UBXN1Q04323 297 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 PPP3CAQ08209 521 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 MYBPC2Q14324 1141 aa11.56□□□□□ -0.56
SOX6-213ENST00000530378 DSC3Q14574 896 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms