RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
CCDC90B-215ENST00000529745 ABLIM1O14639 778 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 PTGESO14684 152 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 RECQL4O94761 1208 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 CSPG5O95196 566 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 MAPTP10636 758 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 IL9P15248 144 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 MARCKSP29966 332 aaPredicted RBP16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 DDIT3P35638 169 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 NDUFV1P49821 464 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 SMTNP53814 917 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 NAB2Q15742 525 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 USP49Q70CQ1 688 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 RBM23Q86U06 439 aaKnown RBP16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 GPR65Q8IYL9 337 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 LINC00301Q8NCQ3 95 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 EPSTI1Q96J88 318 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 RPS6KC1Q96S38 1066 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 REEP2Q9BRK0 252 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 APOL6Q9BWW8 343 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 SNTG2Q9NY99 539 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 PARP2Q9UGN5 583 aa16.98■□□□□ 0.31
CCDC90B-215ENST00000529745 SFI1A8K8P3 1242 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 PER2O15055 1255 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 SLC16A4O15374 487 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 LILRB3O75022 631 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 PPP6R2O75170 966 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 NR1I2O75469 434 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 YEATS4O95619 227 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 SOD2P04179 222 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 SRGAP2BP0DMP2 458 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 GRM5P41594 1212 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 MCM6Q14566 821 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 TMEM132AQ24JP5 1023 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 XKR4Q5GH76 650 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 ZPBP2Q6X784 338 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 GPBP1Q86WP2 473 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 KRI1Q8N9T8 703 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 HERC2P3Q9BVR0 1158 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 CDT1Q9H211 546 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 CCDC39Q9UFE4 941 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 USP20Q9Y2K6 914 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 TRIOO75962 3097 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 PLXNA3P51805 1871 aa16.97■□□□□ 0.31
CCDC90B-215ENST00000529745 CXCL14O95715 111 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 THP07101 528 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 ZSCAN22P10073 491 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 MCF2P10911 925 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 HOXB8P17481 243 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 LIG1P18858 919 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 ABCD1P33897 745 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 TXLNAP40222 546 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 OR1G1P47890 313 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 RAD51AP2Q09MP3 1159 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 TUSC3Q13454 348 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 PTPN14Q15678 1187 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 ATL3Q6DD88 541 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 MPZL3Q6UWV2 235 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 EP400NLQ6ZTU2 488 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 CLIC6Q96NY7 704 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 FIZ1Q96SL8 496 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 TARS2Q9BW92 718 aaKnown RBP16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 COLEC11Q9BWP8 271 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 PARVGQ9HBI0 331 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 KLK14Q9P0G3 267 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 SSX2IPQ9Y2D8 614 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 DENND4AQ7Z401 1863 aa16.96■□□□□ 0.31
CCDC90B-215ENST00000529745 VWA8A3KMH1 1905 aa16.96■□□□□ 0.3
CCDC90B-215ENST00000529745 NPHP3-ACAD11A0A0J9YXS1 232 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 C19orf67A6NJJ6 358 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 CLASP2O75122 1294 aaKnown RBP16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 TOM1L1O75674 476 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 F13A1P00488 732 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 C1RP00736 705 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 PIGRP01833 764 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 STRN3Q13033 797 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 ZNF568Q3ZCX4 644 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 HAUS6Q7Z4H7 955 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 RASSF8Q8NHQ8 419 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 CASP10Q92851 521 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 ST6GALNAC4Q9H4F1 302 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 CHST7Q9NS84 486 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 BARX2Q9UMQ3 279 aaPredicted RBP16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 HCFC2Q9Y5Z7 792 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 ZDBF2Q9HCK1 2354 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 ANK1P16157 1881 aa16.95■□□□□ 0.3
CCDC90B-215ENST00000529745 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 TMEM189-UBE2V1I3L0A0 370 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 CEBPZQ03701 1054 aaKnown RBP16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 STK38Q15208 465 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 RRAGBQ5VZM2 374 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 ANKRD54Q6NXT1 300 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 PPFIBP1Q86W92 1011 aa16.94■□□□□ 0.3
CCDC90B-215ENST00000529745 ADHFE1Q8IWW8 467 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms