RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 VN1R3Q9BXE9 311 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 GDPD2Q9HCC8 539 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 TLR9Q9NR96 1032 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 OLFML3Q9NRN5 406 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 PANK4Q9NVE7 773 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 GDAQ9Y2T3 454 aa17.67■□□□□ 0.42
TSPAN4-218ENST00000529566 BRWD1Q9NSI6 2320 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 CARNS1A5YM72 827 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 NRP1O14786 923 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 ACTN4O43707 911 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 EFEMP2O95967 443 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 ALDH2P05091 517 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 PFKFB1P16118 471 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 KRT17Q04695 432 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 GRIK3Q13003 919 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 ADGRD2Q7Z7M1 963 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 TCHPQ9BT92 498 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 FGFBP2Q9BYJ0 223 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 LRRC27Q9C0I9 530 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 MAGEF1Q9HAY2 307 aa17.66■□□□□ 0.42
TSPAN4-218ENST00000529566 A0A1W2PQ27 194 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 A0A1W2PQ64 194 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 A0A1W2PQD8 194 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 FAM189A1O60320 539 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 CSPG5O95196 566 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 SLFN14P0C7P3 912 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 IDEP14735 1019 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 ABCD1P33897 745 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 CASP5P51878 434 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 AMPD3Q01432 767 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 KCNA1Q09470 495 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 HYAL1Q12794 435 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 NOLC1Q14978 699 aaKnown RBP eCLIP17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 HERC4Q5GLZ8 1057 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 PDE12Q6L8Q7 609 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 DDX53Q86TM3 631 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 FAM193BQ96PV7 902 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 IKZF4Q9H2S9 585 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 MRPL44Q9H9J2 332 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 MARCH5Q9NX47 278 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 TBC1D7Q9P0N9 293 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 ANKFY1Q9P2R3 1169 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 SERTAD1Q9UHV2 236 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 PUF60Q9UHX1 559 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 FAN1Q9Y2M0 1017 aa17.65■□□□□ 0.42
TSPAN4-218ENST00000529566 ANKRD63C9JTQ0 380 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 F8W810 466 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 CLDN3O15551 220 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 CASP1P29466 404 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 GTF2F1P35269 517 aaKnown RBP eCLIP17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 NDUFA8P51970 172 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 OSTNP61366 133 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 EHHADHQ08426 723 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 COASYQ13057 564 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 SKIV2LQ15477 1246 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 CTC1Q2NKJ3 1217 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 HVCN1Q96D96 273 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 TMEM169Q96HH4 297 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 PPP1R10Q96QC0 940 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 RPS6KC1Q96S38 1066 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 PYM1Q9BRP8 204 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 GOLPH3LQ9H4A5 285 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 CIZ1Q9ULV3 898 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 STYXL1Q9Y6J8 313 aa17.64■□□□□ 0.41
TSPAN4-218ENST00000529566 TDRD15B5MCY1 1934 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 A0A0B4J269 797 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 SMIM28A0A1B0GU29 152 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 TISP43B9A030 160 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 HNRNPDLO14979 420 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 THP07101 528 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 MYBP10242 640 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 OR1G1P47890 313 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 LIG4P49917 911 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 TFF2Q03403 129 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 TUSC3Q13454 348 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 SLC10A6Q3KNW5 377 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 SEZ6Q53EL9 994 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 L1TD1Q5T7N2 865 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 CCDC65Q8IXS2 484 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 GRAMD1CQ8IYS0 662 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 RNF168Q8IYW5 571 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 MICAL1Q8TDZ2 1067 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 HLA-CQ95604 372 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 HPS3Q969F9 1004 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 BICD1Q96G01 975 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 PAGE5Q96GU1 130 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 SNX27Q96L92 541 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 ZMAT2Q96NC0 199 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 ACAP3Q96P50 834 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 TCF25Q9BQ70 676 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 PAAF1Q9BRP4 392 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 CCDC94Q9BW85 323 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 ZBP1Q9H171 429 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 NGRNQ9NPE2 291 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 THEGQ9P2T0 379 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 CACNG4Q9UBN1 327 aa17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 COG5Q9UP83 839 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms