RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ENPP3O14638 875 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 KIAA0391O15091 583 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 EXTL3O43909 919 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ADRB2P07550 413 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ACRP10323 421 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 BMP8BP34820 402 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 OSTNP61366 133 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CNKSR3Q6P9H4 555 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FILIP1Q7Z7B0 1213 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 GPD1LQ8N335 351 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 LBHD1Q9BQE6 289 aaPredicted RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FTHL17Q9BXU8 183 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 IL23AQ9NPF7 189 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FAM105AQ9NUU6 356 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 IPPQ9Y573 584 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 PCDHB2Q9Y5E7 798 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 A0A0U1RQF3 1178 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 BECN2A8MW95 431 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 C9IYK1 514 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MEFVO15553 781 aaPredicted RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 LDHAP00338 332 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 GRM5P41594 1212 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FPGSQ05932 587 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CDKAL1Q5VV42 579 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RPUSD2Q8IZ73 545 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 UBE2OQ9C0C9 1292 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 THAP9Q9H5L6 903 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SNTG2Q9NY99 539 aa13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
TRAF3IP2-211ENST00000528599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MEIS3P2A8K0S8 358 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ZNF623O75123 536 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FGFR1OPO95684 399 aaKnown RBP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ZNF18P17022 549 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ATF7P17544 494 aaPredicted RBP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 PSMC2P35998 433 aaKnown RBP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 WNT7BP56706 349 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FAM189BP81408 668 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 PPIGQ13427 754 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SHHQ15465 462 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SLC24A5Q71RS6 500 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MRPL10Q7Z7H8 261 aaKnown RBP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FAM186BQ8IYM0 893 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 PLEKHO2Q8TD55 490 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 BORCS6Q96GS4 357 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 APOL6Q9BWW8 343 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 KIAA1586Q9HCI6 787 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FRMD4BQ9Y2L6 1034 aa13.23□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ZNF233A6NK53 670 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 PFKMP08237 780 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CLTAP09496 248 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 AKAP5P24588 427 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RAB27AP51159 221 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 IKBKEQ14164 716 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SLC10A6Q3KNW5 377 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ZNF598Q86UK7 904 aaKnown RBP13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 LPPQ93052 612 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CNOT6LQ96LI5 555 aaKnown RBP13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MFSD14AQ96MC6 490 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CCDC94Q9BW85 323 aaPredicted RBP13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CXCL16Q9H2A7 254 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 C1orf112Q9NSG2 853 aa13.22□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MAPK13O15264 365 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RECQL4O94761 1208 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CXCL8P10145 99 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ATP1A3P13637 1013 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CYP24A1Q07973 514 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 KYAT1Q16773 422 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CCDC40Q4G0X9 1142 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TMEM240Q5SV17 173 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 BRSK2Q8IWQ3 736 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TDHQ8IZJ6 230 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RNF169Q8NCN4 708 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 PPP1R9BQ96SB3 815 aa13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RBAKQ9NYW8 714 aaPredicted RBP13.21□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ABHD14A-ACY1A0A1B0GW23 586 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 KCNJ18B7U540 433 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 GNA14O95837 355 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 SKIP12755 728 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 ITGA4P13612 1032 aa13.21□□□□□ -0.3
TRAF3IP2-211ENST00000528599 MARSP56192 900 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms