RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 HSCBQ8IWL3 235 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 TMEM161BQ8NDZ6 487 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 LRRC15Q8TF66 581 aa36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 MRPL17Q9NRX2 175 aaKnown RBP36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 TDRD15B5MCY1 1934 aaKnown RBP36.3■■■■□ 3.4
SSSCA1-205ENST00000527920 H0YCG3 227 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 SCP2P22307 547 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 TPRNQ4KMQ1 711 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 FAM173BQ6P4H8 233 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 GPR65Q8IYL9 337 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 RASSF8Q8NHQ8 419 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 RAD54LQ92698 747 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 EMILIN2Q9BXX0 1053 aa36.29■■■■□ 3.4
SSSCA1-205ENST00000527920 BRD1O95696 1058 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 URODP06132 367 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 THP07101 528 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 PROZP22891 400 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 GPBP1Q86WP2 473 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 C1QTNF1Q9BXJ1 281 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 CDT1Q9H211 546 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 DZANK1Q9NVP4 752 aa36.28■■■■□ 3.4
SSSCA1-205ENST00000527920 MAPTP10636 758 aaKnown RBP36.27■■■■□ 3.4
SSSCA1-205ENST00000527920 GRM5P41594 1212 aa36.27■■■■□ 3.4
SSSCA1-205ENST00000527920 STRN3Q13033 797 aa36.27■■■■□ 3.4
SSSCA1-205ENST00000527920 NAB2Q15742 525 aa36.27■■■■□ 3.4
SSSCA1-205ENST00000527920 ZNF568Q3ZCX4 644 aa36.27■■■■□ 3.4
SSSCA1-205ENST00000527920 SLC22A17Q8WUG5 538 aa36.27■■■■□ 3.4
SSSCA1-205ENST00000527920 TARS2Q9BW92 718 aaKnown RBP36.27■■■■□ 3.4
SSSCA1-205ENST00000527920 MCF2P10911 925 aa36.26■■■■□ 3.4
SSSCA1-205ENST00000527920 MARCKSP29966 332 aaPredicted RBP36.26■■■■□ 3.4
SSSCA1-205ENST00000527920 ZNF131P52739 623 aa36.26■■■■□ 3.4
SSSCA1-205ENST00000527920 REEP2Q9BRK0 252 aa36.26■■■■□ 3.4
SSSCA1-205ENST00000527920 ADAM28Q9UKQ2 775 aa36.26■■■■□ 3.4
SSSCA1-205ENST00000527920 GDAQ9Y2T3 454 aa36.26■■■■□ 3.4
SSSCA1-205ENST00000527920 NPHP3-ACAD11A0A0J9YXS1 232 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 PI4K2BG5E9Z4 385 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 ABLIM1O14639 778 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 CNPP09543 421 aaKnown RBP36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 GLUD2P49448 558 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 NCKAP1LP55160 1127 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 ITIH3Q06033 890 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 HSP90AA2PQ14568 343 aaPredicted RBP36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 SLC39A14Q15043 492 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 MPZL3Q6UWV2 235 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 ZPBP2Q6X784 338 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 LARP4BQ92615 738 aaKnown RBP36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 KHSRPQ92945 711 aaKnown RBP eCLIP36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 EPSTI1Q96J88 318 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 KLHL5Q96PQ7 755 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 USP28Q96RU2 1077 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 CCDC94Q9BW85 323 aaPredicted RBP36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 PHF7Q9BWX1 381 aaPredicted RBP36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 CHST7Q9NS84 486 aa36.25■■■■□ 3.39
SSSCA1-205ENST00000527920 F8W810 466 aa36.24■■■■□ 3.39
SSSCA1-205ENST00000527920 DSG1Q02413 1049 aa36.24■■■■□ 3.39
SSSCA1-205ENST00000527920 MCM6Q14566 821 aa36.24■■■■□ 3.39
SSSCA1-205ENST00000527920 KIAA0319Q5VV43 1072 aa36.24■■■■□ 3.39
SSSCA1-205ENST00000527920 FUT10Q6P4F1 479 aa36.24■■■■□ 3.39
SSSCA1-205ENST00000527920 TOPORSQ9NS56 1045 aaPredicted RBP36.24■■■■□ 3.39
SSSCA1-205ENST00000527920 STK17AQ9UEE5 414 aa36.24■■■■□ 3.39
SSSCA1-205ENST00000527920 TOM1L1O75674 476 aa36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 DDIT3P35638 169 aa36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 NASPP49321 788 aaPredicted RBP36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 CBX2Q14781 532 aaPredicted RBP36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 TAS1R1Q7RTX1 841 aa36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 ADAM7Q9H2U9 754 aa36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 PARVGQ9HBI0 331 aa36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 RXFP1Q9HBX9 757 aa36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 CCDC39Q9UFE4 941 aa36.23■■■■□ 3.39
SSSCA1-205ENST00000527920 TXLNAP40222 546 aa36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 YARSP54577 528 aaKnown RBP36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 CACNB1Q02641 598 aaPredicted RBP36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 CEBPZQ03701 1054 aaKnown RBP36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 XKR4Q5GH76 650 aa36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 USP49Q70CQ1 688 aa36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 PPP1R10Q96QC0 940 aaKnown RBP36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 EPHX3Q9H6B9 360 aa36.22■■■■□ 3.39
SSSCA1-205ENST00000527920 SF3B1O75533 1304 aaKnown RBP eCLIP36.22■■■■□ 3.399e-6■■■■■ 68.9
SSSCA1-205ENST00000527920 LOC730098B7Z3J9 87 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 C1RP00736 705 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 EPCAMP16422 314 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 KLRC2P26717 231 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 CLCN4P51793 760 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 DHX8Q14562 1220 aaKnown RBP36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 USP41Q3LFD5 358 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 KIAA1841Q6NSI8 718 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 CEP120Q8N960 986 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 PAAF1Q9BRP4 392 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 TCHPQ9BT92 498 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 GPR62Q9BZJ7 368 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 CXCL16Q9H2A7 254 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 C5orf42Q9H799 3197 aa36.21■■■■□ 3.39
SSSCA1-205ENST00000527920 CASTOR2A6NHX0 329 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 TADA2AO75478 443 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 FAM13AO94988 1023 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 ALADP13716 330 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 ABCD1P33897 745 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 SPECC1Q5M775 1068 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 CES5AQ6NT32 575 aa36.2■■■■□ 3.39
SSSCA1-205ENST00000527920 ALKAL1Q6UXT8 129 aa36.2■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms