RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SOD2P04179 222 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 THP07101 528 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 EPCAMP16422 314 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 KLRC2P26717 231 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 KCNC3Q14003 757 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 PTPAQ15257 358 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 KIAA1841Q6NSI8 718 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 SYCE2Q6PIF2 218 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 TAS1R3Q7RTX0 852 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 CEP120Q8N960 986 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 SNX21Q969T3 373 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 EPSTI1Q96J88 318 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 ACO2Q99798 780 aaKnown RBP17.06■□□□□ 0.32
CAPN1-213ENST00000527897 C17orf75Q9HAS0 396 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 STK39Q9UEW8 545 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 TNFSF13BQ9Y275 285 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 TRIP11Q15643 1979 aa17.06■□□□□ 0.32
CAPN1-213ENST00000527897 PTGESO14684 152 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 SLC26A4O43511 780 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 TADA2AO75478 443 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 FAM13AO94988 1023 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 SP100P23497 879 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 MATR3P43243 847 aaKnown RBP eCLIP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 GLUD2P49448 558 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 TUSC3Q13454 348 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 TPRNQ4KMQ1 711 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 RARS2Q5T160 578 aaKnown RBP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 TMEM184AQ6ZMB5 413 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 USP49Q70CQ1 688 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 C12orf76Q8N812 135 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 RAD54LQ92698 747 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 BICD1Q96G01 975 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 RPGRIP1Q96KN7 1286 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 B3GALT6Q96L58 329 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 USP28Q96RU2 1077 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 REEP2Q9BRK0 252 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 PAAF1Q9BRP4 392 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 HERC2P3Q9BVR0 1158 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 CCDC94Q9BW85 323 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 CDT1Q9H211 546 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 ZSCAN16Q9H4T2 348 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 KCND2Q9NZV8 630 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 LARSQ9P2J5 1176 aaKnown RBP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 ANKFY1Q9P2R3 1169 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 CDH22Q9UJ99 828 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 FBXO2Q9UK22 296 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-213ENST00000527897 ADAM28Q9UKQ2 775 aa17.05■□□□□ 0.32
CAPN1-213ENST00000527897 ZMYM2Q9UBW7 1377 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 CNPP09543 421 aaKnown RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 MYBP10242 640 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 HOXB8P17481 243 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 TXLNAP40222 546 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 YARSP54577 528 aaKnown RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 HSP90AA2PQ14568 343 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 FOXD4L6Q3SYB3 417 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 CES5AQ6NT32 575 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 KANK3Q6NY19 840 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 FUT10Q6P4F1 479 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 FOXD4L3Q6VB84 417 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 GLYCTKQ8IVS8 523 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 TMEM161BQ8NDZ6 487 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 SPIRE2Q8WWL2 714 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 LARP4BQ92615 738 aaKnown RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 KLHL5Q96PQ7 755 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 GPR62Q9BZJ7 368 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 BLOC1S4Q9NUP1 217 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 CCDC39Q9UFE4 941 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 KCNG1Q9UIX4 513 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
CAPN1-213ENST00000527897 IRAK3Q9Y616 596 aa17.04■□□□□ 0.32
CAPN1-213ENST00000527897 FAM86C2PA6NEL3 165 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 K7ENM7 598 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 TBCAO75347 108 aaKnown RBP17.03■□□□□ 0.32
CAPN1-213ENST00000527897 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 MAPTP10636 758 aaKnown RBP17.03■□□□□ 0.32
CAPN1-213ENST00000527897 CBX2Q14781 532 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-213ENST00000527897 MPZL3Q6UWV2 235 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 PPFIBP1Q86W92 1011 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 NTPCRQ9BSD7 190 aaKnown RBP17.03■□□□□ 0.32
CAPN1-213ENST00000527897 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-213ENST00000527897 S1PR5Q9H228 398 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 TOPORSQ9NS56 1045 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-213ENST00000527897 ODF2LQ9ULJ1 636 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 SSX2IPQ9Y2D8 614 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 MYH15Q9Y2K3 1946 aa17.03■□□□□ 0.32
CAPN1-213ENST00000527897 C19orf67A6NJJ6 358 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 KIF4AO95239 1232 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 ADH1AP07327 375 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 GRM5P41594 1212 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 STK38Q15208 465 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 SEZ6Q53EL9 994 aa17.02■□□□□ 0.32
CAPN1-213ENST00000527897 CEP57Q86XR8 500 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms